Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1325 ATGGAGGAGCGGTATGAGCCATTGAAGGAGCTTGGTTCTGGGAATTTTGGTGTGGCCAGGTTGGCAAAAGACAAGAAGACTGGAGAGCTTGTTGCCGTGAAATACATAGAGAGGGGTAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATTAACCACCGATCTTTAAGGCATCCAAATATAATCAGGTTCAAAGAGGTCTTGCTGACCCCGACACATTTAGCTATTGTCTTGGAGTATGCTTCAGGTGGTGAACTTTTTGAGAGGATATGTAGTGCTGGTCGATTTAGCGAAGATGAGGCTAGATATTTCTTCCAGCAGCTAATATCCGGTGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAAAACACTCTCCTGGATGGAAAACCATCTCCTCGACTTAAAATTTGTGACTTTGGTTACTCCAAGTCTGCTCTACTGCACTCTCAACCTAAATCAACAGTTGGAACTCCTGCATACATTGCTCCAGAGGTTCTGTCACGAAAGGAGTATGATGGGAAGATTTCAGATGTTTGGTCCTGTGGTGTGACTCTTTATGTCATGTTGGTTGGTGCATACCCATTTGAAGATCCAGAAGATCCCAGAAATTTCAGAAAGACTATCGGGAGAATAATTGGTGTTCAATACTCCATACCCGACTATGTTCGTGTTTCTTCTGAGTGTAGGAATCTTCTCTCTAGCATCTTTGTTGCTGATCCTGCCAAGAGGATCACCATTCCAGAGATAAAACAGAACCCTTGGTTTCTGAAGAATTTGCCTAAAGAGATCATCGAAGCTGAAAGAAAAGGATTTGAGGAAACAAAGAAAGATCAACCAAGCCAAAAGGTGGAAGAAATCATGAAGATCATACAAGAAGCAAGGGTACCAGGAGAAGGATCCAAAGCTGGTGATGGTATTGGTGGGCAAGGTGCTACTGGATCATTAGATATTGAGGATATCGAGGAAATTGATGTTAGTGGTGATTATGAACATGTGTGA 1017 0.4199 MEERYEPLKELGSGNFGVARLAKDKKTGELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGKPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKISDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSSECRNLLSSIFVADPAKRITIPEIKQNPWFLKNLPKEIIEAERKGFEETKKDQPSQKVEEIMKIIQEARVPGEGSKAGDGIGGQGATGSLDIEDIEEIDVSGDYEHV* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1325 338 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Vra7g1325 338 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Vra7g1325 338 PANTHER SERINE/THREONINE KINASE 3 330 - -
Vra7g1325 338 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1325 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Vra7g1325 338 CDD STKc_SnRK2 4 260 - -
Vra7g1325 338 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1325 338 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1325 338 SUPERFAMILY Protein kinase-like (PK-like) 3 268 IPR011009 -
Vra7g1325 338 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Vra7g1325 338 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 330 - -
Vra7g1325 338 MobiDBLite consensus disorder prediction 300 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1325 Vra-Chr7 30145375 30149634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1325 4 279 CBL-interacting serine-threonine protein kinases AT4G24400 42.105 1.03e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vra7g1325 Pkinase 1.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1325 K14498 - gmx:100782714 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1325 7 30145375 30149634 Vra7g1325 7 30145375 30149634 ECH
Vra11g0425 11 3081845 3085141 Vra7g1325 7 30145375 30149634 PCT