Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1290 ATGGGAAGTGGAGTTTCAAGCCTCCGTTGGTGCTACGGGAGGAACCAACCGGCCGACCAGGATGTCCTATTCAAGGCCACCGACCCATTGGACGAAACCCTAGGACACTCCTTCTGTTACGTCAGATCCTCCGCTCGCTTCCTCTCACCTACTCACTCCGATCGCTTCCTCAGCCCCTCCACCTCCCTCCGCTTCTCCCCCACTCATGAGCCCCGAACCCATGAAACCGGCTTCAAAGCCATTTCCGGAGCCTCCGTTAGCGCCAACAGCTCTCTCCCCACTACAGTCATTCACTTTGACGAAGACACCCTCGATTGCGTCGGAGCTAACACCAAGGGCAATATCGTCAATGGCTTCGAAAGCACGGCGTCGTTTAGCGCGCTCCCGCTCCAGCCCGTTCCCCGAGGCGGCGAGCCCTTCCAGGTCAGCGGCTTCTTCCTCTCCGGTCCAATCGAGGCCAACGCCGTCTCCGGTCCTCTACCCGCCGCCGAAGGCGGCGGCGGCGGCGACGTTCCCTTCTCTGCGCCGCTTAGCGGGCTCTACGGAAAGAAAAGCAGGAAGAAGAAGGTGATTTCGGGATTCCGGAAGGCGTTCAATCGGAACGCCACAGAGATGAAGAGACCGTGGGTGGTGCCGGTGCCGGAGAAGAAGGAGGCGGCGGCGGCGGAGGCGAAGGGCGGTGAGGGCAATGTGCAGTGGGCGTTGGGAAAGGCTGGGGAGGATCGCGTCCACGTGGTGGTGTCGGAGGAGCAAGGGTGGTTGTACGTTGGGATTTACGACGGTTTCAATGGCCCAGACGCGCCGGAGTTTCTGATGGGGCACCTCTACCGTGCTGTTCACAGCGAGCTACAAGGCTTGTTCTGGGAGCTGGAAGACGAACAACCGTTGCCGCAAGAGACTAATCCCGTGGTGGAAGGAACGCAGAGTAAACGGCGTAAACTGTGGGAGCTTCTCGCTGAGGACGGACTGGACCTTTCTGGTTCGGATAGGTTTGCGTTTTCCGTGGACGATGCGTTGAGCGTTAACAACGCCAATGCGGGGTCTGCTGTGAGTAGGAGGTGGCTGTTGCTGTCGAAGTTGAAGCAGGGATTATCGAAGCAGAAGGAGGGTGAAAGGAGGGGGTGGAATTTGGGTAATGAGGAGAAGGAAAAGGAGAAGCCCTCTGGGAGGAAGCGGAAGGTGGGTCCTGTGGATCATGGACTTGTTTTGAGTGCGTTGTCTCGGGCACTTCAAGTCTCGGAGGTTGCGTATTTAGATATGACGGATAAGCTTCTGGATACGAATCCGGAGCTTGCTTTGATGGGTTCGTGTTTGTTGGTTGTGTTGATGAGGGATGAGGATGTGTATGTGATGAATGTTGGGGATAGTAGGGCTATTGTTGCACACTATGAACCAAAGGATGTCGATTCTACTGTTGAATCGGGAAGCAAGGTAGGTGTTGAGTCCGGTGCTGAGAGCATAGTTGAGGAGTCATTGGGTTTGGGTCAAAGTGAAAATGCTCAACAAATGAGGTTGGCGGCGTTGCAACTCTCTACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGGATTAAAAACGAGCATCCTGATGATACCCAATGTATAGTCAATGACAGAGTCAAAGGTCGCCTGAAGGTCACCAGAGCATTTGGCGCTGGATTTTTGAAACAGCCGAAGTTGAATGATGCGGTACTAGAGATGTTTCGAAATGAATATATTGGCACTGCTCCGTATATTTCCTGCTCTCCCTCACTACGTCACCACAGATTATGCCAGAGAGATCAGTTCCTGATCCTTTCATCTGATGGTTTATATCAATATCTAAACAATGAAGAAGTGGTTTCTCATGTTGAGAGCTTCATGGAAAAATTTCCTGAAGGAGATCCGGCCCAACATTTAATAGAAGAGGTGCTTCTCCGTGCAGCTAAGAAAGCTGGAATGGATTTTCATGAATTGCTTGATATACCACAAGGAGATCGGAGGAAGTATCACGATGATGTTACTGTCATGGTAATATCACTTGAAGGGAGAATCTGGAAATCGTCAGGAAAATATCCGTGA 2064 0.5262 MGSGVSSLRWCYGRNQPADQDVLFKATDPLDETLGHSFCYVRSSARFLSPTHSDRFLSPSTSLRFSPTHEPRTHETGFKAISGASVSANSSLPTTVIHFDEDTLDCVGANTKGNIVNGFESTASFSALPLQPVPRGGEPFQVSGFFLSGPIEANAVSGPLPAAEGGGGGDVPFSAPLSGLYGKKSRKKKVISGFRKAFNRNATEMKRPWVVPVPEKKEAAAAEAKGGEGNVQWALGKAGEDRVHVVVSEEQGWLYVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWELEDEQPLPQETNPVVEGTQSKRRKLWELLAEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKQGLSKQKEGERRGWNLGNEEKEKEKPSGRKRKVGPVDHGLVLSALSRALQVSEVAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYEPKDVDSTVESGSKVGVESGAESIVEESLGLGQSENAQQMRLAALQLSTDHSTSIEEEIIRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKLNDAVLEMFRNEYIGTAPYISCSPSLRHHRLCQRDQFLILSSDGLYQYLNNEEVVSHVESFMEKFPEGDPAQHLIEEVLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1290 687 MobiDBLite consensus disorder prediction 368 394 - -
Vra7g1290 687 PANTHER PROTEIN PHOSPHATASE 2C 15 299 IPR015655 GO:0004722|GO:0006470
Vra7g1290 687 PANTHER PROTEIN PHOSPHATASE 2C 377 685 IPR015655 GO:0004722|GO:0006470
Vra7g1290 687 SUPERFAMILY PP2C-like 237 676 IPR036457 -
Vra7g1290 687 CDD PP2Cc 398 675 IPR001932 -
Vra7g1290 687 SMART PP2C_4 224 673 IPR001932 -
Vra7g1290 687 Pfam Protein phosphatase 2C 508 644 IPR001932 -
Vra7g1290 687 Gene3D - 213 682 IPR036457 -
Vra7g1290 687 ProSiteProfiles PPM-type phosphatase domain profile. 218 675 IPR001932 -
Vra7g1290 687 PANTHER PROTEIN PHOSPHATASE 2C 29 15 299 - -
Vra7g1290 687 PANTHER PROTEIN PHOSPHATASE 2C 29 377 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1290 Vra-Chr7 29667951 29672707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1290 1 686 PP2C-type Phosphatase Gene Family AT2G35350 55.094 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1290 - - gmx:100781535 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0463 11 3437811 3443346 Vra7g1290 7 29667951 29672707 PCT