Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1288 ATGGGAGGGGCAACACTTCCACCAGGATTTCGTTTCCATCCAACTGATGAGGAACTAGTGGGATACTACCTTAAAAGAAAAGTAGAGGGGCTTGAAATTGAGCTTGAAGTTATCCCTGTGATCGATTTTTACAAATTCGATCCCTGGGAGTTGCCGGAGAAGTCTTTCCTTCCAAAACGGGATATGGAATGGTTTTTCTTTTGTCCACGGGATCGCAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGGTATTGGAAAGCCACCGGAAAAGACAGAAAGGTGGTGTGCCAGTCTGATCCATCCAATGTTACTGGGTACCGCAAGACCTTGGTTTTCTATGCTGGGAGGGCCCCTTTAGGAGATAGAACTGATTGGGTCATGCATGAGTATCGCCTCTGTGATGATCTTGGCCAACCCACACCTTCTTTCCAGGGTGGTTTTGCCTTGTGCCGGGTTATTAAGAAGAATGAGAAAGCAAGTGCTACGAAAGGAGAAAACAAGGGCAAAAGGGCTGGAAGCAGTTCCATTAATGGGAGTGACACCTCAGTGAGATTCTCTGGTGAGCCATTCAGCAATTCTGGTGATTCTTCCTCTCATGCAAGCCAACTGAATAATGAGAGTCGTTATTCAAGCCCAATTACTTCTCCATACAATGTGGCTCCAATGGGAGAGATTAACCAAGCTTCTCTGGAAACCAATCCTTCAAACTTCTGGATCTCCCCGGACATGATTCTTGATTCTTCAAAGGACTACCCTCAATTACAGCATGCTGTATCTGAATATTTTCCACGGTATAACCTACCAAGTATGGGGACACAATGGCAATCAGTGGAACATTCAGAAACTCCATCTAGTTTCTCCTACTCAAACGTCAATGGAGAAGTTGAATTTGCTGATACTCTCAGTCAAATTGGCGGCATGTCACCTTACTCAAGAGAATGGAATTCCATGGACTTCTATGGAAATGGAGATGTCCCTTATGAAGATTATGATCAAATTAACTCAATCTCATATCCATGA 1032 0.4409 MGGATLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSDPSNVTGYRKTLVFYAGRAPLGDRTDWVMHEYRLCDDLGQPTPSFQGGFALCRVIKKNEKASATKGENKGKRAGSSSINGSDTSVRFSGEPFSNSGDSSSHASQLNNESRYSSPITSPYNVAPMGEINQASLETNPSNFWISPDMILDSSKDYPQLQHAVSEYFPRYNLPSMGTQWQSVEHSETPSSFSYSNVNGEVEFADTLSQIGGMSPYSREWNSMDFYGNGDVPYEDYDQINSISYP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1288 343 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 343 - -
Vra7g1288 343 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 343 - -
Vra7g1288 343 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Vra7g1288 343 MobiDBLite consensus disorder prediction 163 219 - -
Vra7g1288 343 MobiDBLite consensus disorder prediction 171 219 - -
Vra7g1288 343 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Vra7g1288 343 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Vra7g1288 343 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1288 Vra-Chr7 29631061 29634039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1288 1 300 NAC Transcription Factor Family AT4G17980 54.934 8.07e-111 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra7g1288 NAM 1.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1288 - - gmx:100792714 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1288 7 29631061 29634039 Vra7g1288 7 29631061 29634039 ECH