Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1229 ATGAAACCTCACCATCATCATTTCACCTTCTTTTTCATTCTATCATCATTCTCTCTACTTCCCACTTCCACACCTACCAACACAACTCAATTCCGCATTTTCAATGAAACCAGAAGGATTCTCCACCAGCCTCTGTTCCCGGAGCTCTCAGCTCCGCCGCCACTCACCCCTCCGCCCCCTCCGCCCCCGGATATTCCTTCTTCTCCCGACATTCCTTTCTTCAATGAGTATCCCGCGGGGCAGCCACCGCCAGTTCAGAACCTGCCTCCGGCGACATCCTCCGGCGCCGTGATCGCCAACCCGACGGCGACACAGCCCACGAAGCCCGCGAAGAAGGTGGCAATTGCGATCTCCGTGGGAATCGTGACCCTGGGAATGTTCTCCGCTTTGGGCTTCTTCTTGTACCGGCACAGAGCAAAACACCCAGTGGAAACTCAGAAACTCGTTTCTCGTAGGCTTCCGGAAGATTCTCCGCGGGCCCCACCACCCTCGAGCTTCCTCTACATTGGAACAGTGGAGCCCGCCAGAACGTCGCTCACCGAACCCAACGTAACGAACATTATGACATCTCCTTATCGAAAGCTTGATTCTGTTAAGCTTAACTCCGATCACCGTTACCGCCCCAGTCCCGAGTTGCAGCCGCTGTCGCCGCCTCAAAAGCCACCGGACGAAAGCCACTCGCCGCCGGCAGGATTCTCCGACTCATCGTCATCGTCCGAGGAGGAAAGCTGTGAGACGGCATTTCACTCGCCGCACGGGTCGTCGCTAAGCCGTGAAGAGAATTGTTTCACGCCCGTCTCGCGCCACAGTTGTCTCGCCGCAGCCATACCAGCGCCGGCTGCTGCTGCTGCTGCTCCGGTGGTTCCTTACTCGAAGAGAACTTCACCGAAATCCAGGTTCTCTGCTCCTTCGCCGGATATCAGAAACATGGTCGTACCGCCGGCGAAGCATTCTCCGCCGCCGGCACAGGCGCCACCAGCTTCAACCAAATATCAGCAAATAGAAAAAGTAACTAGCATGGGTCCTTCTAGAAGACCAAAATTCTCATCGCCTCCACCAGCACCGAATTTGACTCATCTTATGAAGCCTGCCGCTCCACCTCCTCCACCTCCTCCTCCTCCACCGCCGCCGCCGCCGCCGCCACCGCCTCAGAAGGGTTGGTCTGCGTCAATTAGTGCATCTTCGTCCTCTGTGCCAAGGAAGCAGCGAGAGTCTTGGTCTGGAAATGGAGGAGGGTCTTCTGTTAACAGTGTTAGTGTAAGGAAAGGTTGTACCGAGGAAGTTGACAAAAGGCATGCAGGCGATGACGTGGGCGGAGCGAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTTTGTGCTACTTCGGACCGTACCACTGTGTGGGATCAGTTAAAATCCAGCTCCTTTCAGTTAAACGAGGACATGATGGAGACCCTGTTTGGCTGCAAATCTACAGCTTCTGCTTTTAAACACACTGTCAGTAGGAGATCAGTTCTTCCCCCTGTTGAACTCGAAAATAGGGTGTTAGACCCCAAGAAATCCCAAAACATAGCTATACTGCTAAGGGCACTTAATGTCACAAGAGATGAGGTCTGCGAAGCTCTTTTGGATGGGAACCCTGAAGGTTTGGGAACTGAGTTATTGGAGACTCTAGTGAAGATGGCTCTAACAAAGGAAGAGGAAATAAAACTTAAAAATTATGATGGTGACCTATCAAGACTTGGTTCTGCAGAAAGATTTCTCAAAGCAGTGCTTGATATCCCTTTAGCTTTTAAAAGAATTGAAGCCATGCTATACAGAGCTAATTTCGAAACAGAAGTTAACTACCTTAGGAAGTCCTTTCAGACACTCGAGGCTGCAAGTGAGGAATTAAAGCACAGTAGGCTATTTCTCAAACTTCTTGAAGCCGTTCTAAGGACAGGAAACAGAATGAATGTTGACACAAACCGTGGTGATGCTAAATCCTTCAAACTAGACACACTTCTAAAACTGGTAGATATAAAGGGCACAGATGGGAAGACAACGCTTCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGAACAGGTGGTGAATCTGCAAACGAAAATGTTCAAAACCAGACAACTTCCCAATACAACGAGGACGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCCGGACTGAGTAGAGACCTAGGTAATGTCAAAAAGGCAGCAGGGATGGATTCGGATGTGTTGAGAAGCTATGTCTCAAAGCTTGAAAGTGGGCTAGATAAAGTGAGCTTAGTTTTGCAATGCAGAAAGCCTGATATGTATGGAAATTTCTTTAATTCAACTGGGCTATTTCTTAAAGACGCTGAAGCGGAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTGTTCCTTGTGAAAGAAGTTACAGACTATTTTCATGGTGATGCAGCAAAGGAAGAGGCGCACCCTTTCAGAATTTTTATGATTGTGAGAGACTTTCTAAATAGTTTGGATCAAGTCTGTAAAGAAGTGGGAAGGATGCAAGACAGAACTGTGGTTGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCATTACCTGTTCTCAACAGATACCATGCAAGACAAGATACAAGTTCAGACGAGGAAAGTTTATCCCCCTAG 2652 0.4921 MKPHHHHFTFFFILSSFSLLPTSTPTNTTQFRIFNETRRILHQPLFPELSAPPPLTPPPPPPPDIPSSPDIPFFNEYPAGQPPPVQNLPPATSSGAVIANPTATQPTKPAKKVAIAISVGIVTLGMFSALGFFLYRHRAKHPVETQKLVSRRLPEDSPRAPPPSSFLYIGTVEPARTSLTEPNVTNIMTSPYRKLDSVKLNSDHRYRPSPELQPLSPPQKPPDESHSPPAGFSDSSSSSEEESCETAFHSPHGSSLSREENCFTPVSRHSCLAAAIPAPAAAAAAPVVPYSKRTSPKSRFSAPSPDIRNMVVPPAKHSPPPAQAPPASTKYQQIEKVTSMGPSRRPKFSSPPPAPNLTHLMKPAAPPPPPPPPPPPPPPPPPPQKGWSASISASSSSVPRKQRESWSGNGGGSSVNSVSVRKGCTEEVDKRHAGDDVGGAKPKLKALHWDKVCATSDRTTVWDQLKSSSFQLNEDMMETLFGCKSTASAFKHTVSRRSVLPPVELENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELLETLVKMALTKEEEIKLKNYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLEAASEELKHSRLFLKLLEAVLRTGNRMNVDTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANENVQNQTTSQYNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLRSYVSKLESGLDKVSLVLQCRKPDMYGNFFNSTGLFLKDAEAEIVRIKADERKALFLVKEVTDYFHGDAAKEEAHPFRIFMIVRDFLNSLDQVCKEVGRMQDRTVVGSARSFRIAASASLPVLNRYHARQDTSSDEESLSP* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1229 883 MobiDBLite consensus disorder prediction 387 421 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 149 168 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 198 259 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 90 105 - -
Vra7g1229 883 Pfam Formin Homology 2 Domain 441 832 IPR015425 -
Vra7g1229 883 ProSiteProfiles Formin homology-2 (FH2) domain profile. 434 858 IPR015425 -
Vra7g1229 883 PANTHER FORMIN-RELATED 12 883 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra7g1229 883 SUPERFAMILY Formin homology 2 domain (FH2 domain) 372 845 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 47 105 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 282 441 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 211 225 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 229 259 - -
Vra7g1229 883 SMART it6_source 434 847 IPR015425 -
Vra7g1229 883 Gene3D Formin, FH2 domain 437 844 IPR042201 -
Vra7g1229 883 MobiDBLite consensus disorder prediction 423 441 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 346 386 - -
Vra7g1229 883 PANTHER FORMIN-LIKE PROTEIN 12 883 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 47 69 - -
Vra7g1229 883 MobiDBLite consensus disorder prediction 327 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1229 Vra-Chr7 28720126 28724436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1229 415 873 FH2 protein (formin) Gene Family AT5G67470 71.058 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1229 - - gmx:100803578 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0517 11 3896806 3902549 Vra7g1229 7 28720126 28724436 PCT