Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1227 ATGAGAGGAGAAGAGTTAGCGTTTGAAGTTGGTGGAAGCATGGTGGTGGTGACTGTGAGAGAGTTCGACCCAAGTAAAGACACAGAGGGAGTGGAAGCCGTTGAAAGAATATGTGAGGTTGGACCCAGTGGGAAGCTTTCCCTCTTCACCGACCTCCACGGTGACCCTATTTGCAGGGTCCGCAACTCACCTACTTTCCTAATGCTGGTAGCCGAAATTGGTCAAGAGACAGTGGGAATGATAAGGGGTTGCATCAAAATCGTTACATGCGGAAAGAAGCTCCACAGGCACCGAAAGAACACCAGCGAACCTGCTTCCAAACAAGTCCCTGTCTACACCAAACTAGCCTACATATTGGGCCTCCGGGTTTCTCCGAACCACAGGAGAATGGGAATAGGGTTCAAACTGGTCCAGAGATTGGAGGAGTGGTTCAGAGAGAACGGAGCAGAGTACGCTTACATGGCAACAGAAAAGGACAACGTGGCATCCGTTAAGCTCTTTACCGACAAATGCGGCTACTCAAAGTTTCGTACCCCGTCCATCCTCGTCAACCCCGTTTTTGCTCACTCACTCACACCCTCCTCCAACGTCACCATCATACAACTTCCCCCAAACGACGCCGAGTTCCTCTACCGCACCAAGTTCGCCACCACCGAGTTCTTCCCCCGCGACGTCGACTCCGTTCTCAACAACCACCTCACTCTCGGCACCTTCCTCGCCGTTCCTCGCGGCTCATACTCCCCCGACACGTGGCCGGGTTCGCCCCGCTTTCTCGCGGACCCACCCCCCTCCTGGGGCCTCCTCAGCGTGTGGAACTGTAAGGACGTGTTCACGCTCCAGGTGATGGGCGCGTCGCGCGTGAAGAAGGCCATCGCGAAGACCACTCGCCTCCTCGACCGCGCCTTCCCCTGGCTGCGCCTCCCCTCCATCCCCAACTTCTTCCGGCCCTTTGGGTTTCACTTTTTGTACGGGCTAGGAGGGGAGGGCCCACGGGCCCAGAAGATGGTGAGGGCTCTGTGCGCCTTCGCTCATAACCTCGCCAAGGATAGTGGGTGCCAGGTGGTGGCGACGGAGGTTTCAGGGCAGGAGCCCCTACGCTGCGCCATCCCACACTGGAAGATGCTCTCTTGCGAAGAGGATTTGTGGTGCATCAAGAGACTCGGGGAAGATTACAGCGACGGTGCGGTTGGTGATTGGACCAAATCCCCTCCGGGATTCTCAATTTTTGTTGATCCCAGAGAGTTCTAA 1248 0.5625 MRGEELAFEVGGSMVVVTVREFDPSKDTEGVEAVERICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIGQETVGMIRGCIKIVTCGKKLHRHRKNTSEPASKQVPVYTKLAYILGLRVSPNHRRMGIGFKLVQRLEEWFRENGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPSILVNPVFAHSLTPSSNVTIIQLPPNDAEFLYRTKFATTEFFPRDVDSVLNNHLTLGTFLAVPRGSYSPDTWPGSPRFLADPPPSWGLLSVWNCKDVFTLQVMGASRVKKAIAKTTRLLDRAFPWLRLPSIPNFFRPFGFHFLYGLGGEGPRAQKMVRALCAFAHNLAKDSGCQVVATEVSGQEPLRCAIPHWKMLSCEEDLWCIKRLGEDYSDGAVGDWTKSPPGFSIFVDPREF* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1227 415 Gene3D - 50 179 - -
Vra7g1227 415 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 56 175 IPR016181 -
Vra7g1227 415 PANTHER N-ACETYLTRANSFERASE 14 415 - -
Vra7g1227 415 CDD NAT_SF 68 153 - -
Vra7g1227 415 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 192 IPR000182 GO:0016407
Vra7g1227 415 Pfam Acetyltransferase (GNAT) family 63 173 IPR000182 GO:0016407
Vra7g1227 415 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 14 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1227 Vra-Chr7 28679686 28682294 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra7g1227 Acetyltransf_1 4.1e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1227 - - gmx:100775317 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0519 11 3929369 3931359 Vra7g1227 7 28679686 28682294 PCT