Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1221 ATGACGCAATTCACACCCTTCCACCAAATCACACCTCTCCCCAACCCTACCATGAACAAAAACCAAATCCCTAGGACTAGGCCCTGGCCTGCAGGCTTTCCTACCTCCAAGACCTTAACCAACTTCGCCGACGCTAACTGCATGGAACAGTTACTTCTTCACTGTGCCAACGCTATTCAAACCAACGACGTAACCCTCGCACAGCAAATCCTTTGGGTCCTCAACAACATAGCATCCCCCGACGGCGACTCCAATCAACGCCTTGCCTCCAGCTTCCTCCGTGCCCTCACTGCACGTGCTGCCCATACCGGCACCTGTAAGATGCTCGTCGCCGTAGCTGATCACGCCCGCACCAACCTCTCCATAGACACCCACAAGTTCTCCGTCATCGAGCTCGCCAACTTCGTCGACCTAACCCCCTGGCACCGCTTCGGCTTCACCGCTGCCAACGCCGCCATCCTAGAAGCCACTGAGGGTTTCTCCGTCATCCACATCGTCGATCTCAGCCTCACGCATTGCATGCAGATTCCGACGCTCATCGACGCCATCGCCAGCCGCCACGAGGTCCCTCCTCTCATCAAACTCACTGTTCCCGATGCCACCTTCAGAGACATCCCTCCTATGCTCGACCTCTCCTACGACGAACTCGGCGCCAAGTTGGTCAATTTCGCAAGGTCCAGGAACGTCGTCATGGAGTTCAGAGTGGTTTCTTCCACTTACCAAGATGGTTTTGCTGGTTTGATCGAACAGTTAAGAGTGCAACAACAGCATTTTGTTTATGCAGTAGAACCTCGTCCCTGTGAGGCTTTGGTTATCAACTGTCACATGATGCTTCACTACACCCCCGACGAAACCCTACACGCGATGCCTGAAAGTGACTTAACCTCTTTGCTCTATGATTCTTCTTCGGCTGCCGGTTCTTCTTCTGCCATTAGTGTCACTTCCACTTCCTCGCTGCGATCATTGTTCCTTAAGTCCCTGCGGGGTTTAGATCCAACTGTTGTAATCTTGGTGGATGAAGATGCAGATTTGACATCCAATAACTTGGTTTGCAGGCTAAGATCTGCGTTTAACTATCTGTGGATACCATACGACACTGTGGACACGTTCCTTCCACGAGGGAGCAAGCAAAGGCAGTGGTACGAAGCAGACATTTGCTGGAAGATTGAGAACGTTATAGCGCAGGAAGGGGTTCAGAGGGTGGAGAGGGTTGAGCCTAAGAACAGGTGGGAGCAGCGAATGAAGAACGCGAACTTCCAAGGGGTGGCTTTTAGTGAGGACTCTGTTGCGGAGGTGAAGGGCATGCTTGATGAGCATGCTGCGGGGTGGGGATTGAAGAGGGAAGATGAACACATTGTCCTCACTTGGAAAGGACACAACGTGGTCTTTGCCTCTGCTTGGTTACCTGCTTGA 1413 0.5251 MTQFTPFHQITPLPNPTMNKNQIPRTRPWPAGFPTSKTLTNFADANCMEQLLLHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAHTGTCKMLVAVADHARTNLSIDTHKFSVIELANFVDLTPWHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVPPLIKLTVPDATFRDIPPMLDLSYDELGAKLVNFARSRNVVMEFRVVSSTYQDGFAGLIEQLRVQQQHFVYAVEPRPCEALVINCHMMLHYTPDETLHAMPESDLTSLLYDSSSAAGSSSAISVTSTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAQEGVQRVERVEPKNRWEQRMKNANFQGVAFSEDSVAEVKGMLDEHAAGWGLKREDEHIVLTWKGHNVVFASAWLPA* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1221 470 MobiDBLite consensus disorder prediction 1 24 - -
Vra7g1221 470 PANTHER SCARECROW-LIKE PROTEIN 32 24 468 - -
Vra7g1221 470 MobiDBLite consensus disorder prediction 1 27 - -
Vra7g1221 470 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 468 IPR005202 -
Vra7g1221 470 Pfam GRAS domain family 48 467 IPR005202 -
Vra7g1221 470 ProSiteProfiles GRAS family profile. 39 468 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1221 Vra-Chr7 28574705 28577209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1221 30 469 GRAS Transcription Factor Family AT3G49950 57.207 1.08e-175 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vra7g1221 GRAS 7.5e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1221 - - gmx:100814364 764.222