Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1219 ATGGGTCGGCTTAATCTCATACTTGTGTGGTCGCTCTCATTAACACTGTCCCTTTATAATCTACATACAACCTCTGCCCAGCTTAGTCCAAACCACTACGCTAATGTATGCCCCAATCTCGAAAGCATCGTTAGACAGGTAGTTACCACCAAGTTCCAGCAAACCTTTGTCACTGTTCCAGCCACCCTTCGTCTCTTCTTCCACGATTGCTTTGTCCAGGGTTGTGATGCCTCGGTTTTGGTGGCATCTACTGGGAACAACCAAGCGGAGAAGGATCACCCAGACAATCTTTCATTGGCAGGTGATGGATTTGACACGGTGATCAAAGCAAAAGCTGCAGTAGATGCTGTCCCACAGTGCAGGAACAAAGTCTCGTGTGCTGATATTTTGGCCTTGGCTACCCGTGATGTTATCGTACTGTCTGGTGGACCTTCGTATACCGTTGAATTGGGAAGGTTTGATGGGTTAGTTTCAAGAGCTTCTGATGTAAATGGAAGGCTTCCGAAACCCACGTTCAATTTGAACCAGCTCAACTCCCTTTTTGCTGCAAATGGACTCACCCAAACTGATATGATTGCTCTCTCAGGTGCACACACTCTTGGATTCTCCCACTGCAGCAAGTTCGCGAATAGAATATACAACTTCAATGGGCAAACTCCAGTGGACCCATCATTGAACAGGCAATACGCAATCCAATTGCAACAGATGTGCCCGAGGAACGTGGATCCAAGGATTGCCATTAACATGGACCCAACCACTCCCCGAAGATTCGATAACGTTTATTACCAAAACCTCCAACAAGGAAAGGGCCTTTTCACCTCGGATCAAATCCTCTTCACTGACCAAAGGTCCAGGAACACTGTTAATTCCTTTGCTTCAAATGCTAACGTTTTCAACTCTAACTTCATTGCCGCTATCACCAAACTGGGTCGTGTTGGAGTTAAGACAGCAAGAAACGGCAAAATTCGTACCGATTGTTCTCTGCTTTAA 990 0.4616 MGRLNLILVWSLSLTLSLYNLHTTSAQLSPNHYANVCPNLESIVRQVVTTKFQQTFVTVPATLRLFFHDCFVQGCDASVLVASTGNNQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVIVLSGGPSYTVELGRFDGLVSRASDVNGRLPKPTFNLNQLNSLFAANGLTQTDMIALSGAHTLGFSHCSKFANRIYNFNGQTPVDPSLNRQYAIQLQQMCPRNVDPRIAINMDPTTPRRFDNVYYQNLQQGKGLFTSDQILFTDQRSRNTVNSFASNANVFNSNFIAAITKLGRVGVKTARNGKIRTDCSLL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1219 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Vra7g1219 329 PANTHER PEROXIDASE 1 328 - -
Vra7g1219 329 Pfam Peroxidase 44 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 Gene3D - 31 327 - -
Vra7g1219 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vra7g1219 329 Gene3D Peroxidase, domain 2 168 309 - -
Vra7g1219 329 CDD secretory_peroxidase 27 327 IPR033905 GO:0004601|GO:0042744
Vra7g1219 329 PANTHER - 1 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra7g1219 329 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1219 Vra-Chr7 28558698 28561111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1219 1 326 Peroxidase AT5G67400 68.405 8.32e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1219 K00430 - gmx:100819937 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1219 7 28558698 28561111 Vra11g0522 11 3979543 3981165 PCT