Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1212 ATGGCTTCCATTTCCACAGCTTTGCCTCTGCTTCTCTCGCTTCTTCTGTTACTCGGTCGCTACGATGCGGCTCAGGCGCCAGAACCGGAGAGGGGAACCTACATTGTACACGTCGCAAAGTCGGAAATGCCCCAAAGCTTTGAACACCATACGGTGTGGTACGAGTCGTCGCTCAAATCCGTTTCTGACTCGGCCAAAATGATTTACACCTACGATAACGCCATCCACGGATATGCGACTAGATTAACTGCGGAGGAAGCGCGTTTGCTGGAAAGCCAAACTGGGATTCTGGCGGTTTTGCCGGAGATGAGGTATGAACTTCACACAACGAGGACGCCGCAGTTCCTGGGTCTCGACAAGAGCGCCGACATGTTCCCCGAGTCGAGCTCCGCGAGTGACGTCATCGTTGGAGTCCTGGACACTGGCGTTTGGCCTGAGAGCAAGAGCTTCGACGACACGGGGCTTGGACCTGTTCCCAGTACCTGGAAAGGTGAGTGTGAAACGGGAACGAACTTCAGTGCTTCCAACTGCAACAGAAAGTTGATCGGAGCCAGGTTCTTTGCGAAGGGTTGCGAGGCCATGTTGGGTCCTATTAACGAGACTGAGGAGTCTAGATCCCCTCGCGACGATGACGGTCACGGCACCCACACAGCCAGCACTGCCGCGGGATCGGTGGTTTCCGGCGCAAGTCTTTTCGGTTACGCATCCGGGACGGCGCGTGGGATGGCGACGCGCGCGAGAGTCGCTGCTTACAAGGTTTGCTGGAAGGGTGGGTGTTTCAGTTCCGATATTCTTGCGGCAATTGAGAGCGCGATACAAGACAACGTTAATGTGTTGTCGTTGTCGCTTGGTGGTGGAATGGCTGATTATTACAGAGACAGTGTCGCTATTGGAGCTTTTTCCGCGATGGAGAAAGGGATCTTAGTTTCTTGCTCCGCCGGGAACGCGGGTCCTAGTCCTTACAGTCTCTCAAACGTGGCACCATGGATTACGACCGTGGGTGCCGGTACTCTGGATCGTGACTTCCCTGCTTATGTTGCTCTAGGGAATGGACTTAACTTCTCCGGCGTGTCGCTATACCGAGGTAGCGCTTTACCTGATTCACCGTTACCGTTTGTTTACGCAGGCAATGCCAGCAACGCTACGAACGGGAACTTGTGCGTGACGGGAACCTTGTCGCCCGAGAAAGTAGCAGGAAAGATTGTGTTATGTGACCGTGGATTAACTGCTAGGGTACAGAAAGGTTCGGTTGTGAAATCCGCCGGTGCTTTGGGCATGGTCTTGAGCAACACCGCCGCCAACGGCGAGGAGCTGGTGGCTGATGCTCATCTGTTGCCGGCGTCGGCGGTGGGGGAGAAAGCCGGCGACGCCATCAAGAAGTATTTGTTTTCCGAGTCTAAACCGACGGTGAGGATTTTGTTCGAGGGAACGAAGGTGGGGATTCAGCCATCACCTGTGGTTGCAGCGTTTAGCTCGAGAGGTCCCAACTCGATCACGCCTCAGATCCTGAAACCAGATCTGATCGCGCCAGGTGTCAACATCTTGGCTGGGTGGTCAAAGGCCGTGGGTCCCACAGGTTTGCCCGTTGATAACAGGCGCGTGGATTTCAATATCATCTCTGGGACCTCGATGTCTTGTCCTCACGTGAGCGGATTAGCCGCATTGATAAAATCGGTTCACCCAGAGTGGAGCCCAGCCGCGGTTCGATCTGCTCTAATGACAACGGCTTACACCGTTTACAAAACCGGTGAGAAGTTGCAAGACAGTGCAACGGGAAAACCCTCCACGCCGTTTGATCACGGAGCGGGACACGTGGACCCGGTGGCTGCCCTCAATCCAGGGCTGGTGTATGATCTAACAGTGGATGATTATCTTGGTTTTCTCTGCGCGTTAAACTACTCTGCCTCAGAAATCAACACCCTGGCGAAGAGAAAATTCGAGTGCGAGGCGGGCAAACAGTACAGTGTGAACGACCTGAACTACCCGTCGTTTGCGGTGTTGTTTGAATCAGGGAGTGGGTCCGGCGTGGTGAAGCACAGTCGAACCGTCACTAACGTGGGGCCCGCAGGAACGTACAAGGCTACAGTGACATCAGACGCGGCTTCAGTGAAAATCTCGGTTGAACCGGAAGTGCTGAGTTTGAAGGAGAACGAGAAAAAATCGTTCGTGGTAAGTTTTTCATCCTCGGGTTCCACACAAGAGAGAGTGAATGCGTTTGGACGGTTGGAATGGTCTGATGGGAAGCACGTGGTTGGGGCCCCAATCTCAATTAACTGGGGTTGA 2283 0.5414 MASISTALPLLLSLLLLLGRYDAAQAPEPERGTYIVHVAKSEMPQSFEHHTVWYESSLKSVSDSAKMIYTYDNAIHGYATRLTAEEARLLESQTGILAVLPEMRYELHTTRTPQFLGLDKSADMFPESSSASDVIVGVLDTGVWPESKSFDDTGLGPVPSTWKGECETGTNFSASNCNRKLIGARFFAKGCEAMLGPINETEESRSPRDDDGHGTHTASTAAGSVVSGASLFGYASGTARGMATRARVAAYKVCWKGGCFSSDILAAIESAIQDNVNVLSLSLGGGMADYYRDSVAIGAFSAMEKGILVSCSAGNAGPSPYSLSNVAPWITTVGAGTLDRDFPAYVALGNGLNFSGVSLYRGSALPDSPLPFVYAGNASNATNGNLCVTGTLSPEKVAGKIVLCDRGLTARVQKGSVVKSAGALGMVLSNTAANGEELVADAHLLPASAVGEKAGDAIKKYLFSESKPTVRILFEGTKVGIQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLPVDNRRVDFNIISGTSMSCPHVSGLAALIKSVHPEWSPAAVRSALMTTAYTVYKTGEKLQDSATGKPSTPFDHGAGHVDPVAALNPGLVYDLTVDDYLGFLCALNYSASEINTLAKRKFECEAGKQYSVNDLNYPSFAVLFESGSGSGVVKHSRTVTNVGPAGTYKATVTSDAASVKISVEPEVLSLKENEKKSFVVSFSSSGSTQERVNAFGRLEWSDGKHVVGAPISINWG* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1212 760 CDD Peptidases_S8_3 105 577 IPR034197 -
Vra7g1212 760 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Vra7g1212 760 Gene3D Peptidase S8/S53 domain 133 624 IPR036852 GO:0004252|GO:0006508
Vra7g1212 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 108 IPR037045 -
Vra7g1212 760 Gene3D - 628 759 - -
Vra7g1212 760 Pfam Subtilase family 132 587 IPR000209 GO:0006508|GO:0008236
Vra7g1212 760 Pfam PA domain 385 458 IPR003137 -
Vra7g1212 760 Pfam Fibronectin type-III domain 658 757 IPR041469 -
Vra7g1212 760 ProSiteProfiles Serine proteases, subtilase domain profile. 104 611 - -
Vra7g1212 760 SUPERFAMILY Subtilisin-like 107 615 IPR036852 GO:0004252|GO:0006508
Vra7g1212 760 SUPERFAMILY PA domain 389 459 IPR046450 -
Vra7g1212 760 CDD PA_subtilisin_like 345 472 - -
Vra7g1212 760 Gene3D - 339 480 - -
Vra7g1212 760 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 22 758 - -
Vra7g1212 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vra7g1212 760 MobiDBLite consensus disorder prediction 198 220 - -
Vra7g1212 760 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Vra7g1212 760 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vra7g1212 760 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vra7g1212 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 758 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1212 Vra-Chr7 28471646 28474392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1212 14 759 Subtilisin-like Serine Gene Family AT5G67360 72.059 0.0 1121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1212 - - gmx:100815413 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0533 11 4071796 4074327 Vra7g1212 7 28471646 28474392 PCT