Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1200 ATGACCTTCCTCACGGAGGATCAGGATCAATGGCTGAGTTTAGGCCTGAAAGGAGACATGACTGTGGAGGCAGCAGCAGAAGAACAAAAGTCGTCAAAGGCTGAGCAGAACAAGGTATTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGCTCACAAGCTTTGGGGGGTCACCAGAATGCACACAAGAGGGAGAGAGAAGCAGCAAGAAGCTACCAGTCTCATAGGATGATGACAGCAAGATCACCAATGGGGTTTGCTTATACTTCTCTGGCATCTAGGTCACTCGGAATACAGCCTCACTCCCTTGTGCACAAACCAGGCAGAGAAAGGTCTGCTATGGTCGCTAGATTCAGTGATGCCAACATTAATGGCGCTGGAGTGGCATCCTGGACACCCTTTCTGCTCGAACAGGCCGTGGATTTCTATTGGCCAGGTAGCTTTCGGCCGGACTTGCCAAAACAAGAATCAGATGTTAATAATAAGATTGACTTAGATCTTCGCCTCTGA 510 0.4824 MTFLTEDQDQWLSLGLKGDMTVEAAAEEQKSSKAEQNKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYQSHRMMTARSPMGFAYTSLASRSLGIQPHSLVHKPGRERSAMVARFSDANINGAGVASWTPFLLEQAVDFYWPGSFRPDLPKQESDVNNKIDLDLRL* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1200 169 Gene3D Classic Zinc Finger 15 90 - -
Vra7g1200 169 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 169 - -
Vra7g1200 169 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Vra7g1200 169 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 169 - -
Vra7g1200 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Vra7g1200 169 SUPERFAMILY beta-beta-alpha zinc fingers 37 67 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1200 Vra-Chr7 28270510 28271480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1200 4 159 C2H2 Transcription Factor Family AT1G24625 41.139 4.46e-27 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1200 - - vun:114176846 273.863