Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1187 ATGACTCTCTTCTGTCAACCTCTCATAATTTCACTGCTTCTTCTTCTCGCTGTTCACCACTCTTCTGCCCTCACTAGAGACGGCGTTCTGTTGCTTTCTTTCAAGTACGCTGTGCTCAACGACCCTCTTTACGTCCTCGCAAACTGGAACTACACTGACCAGACACCCTGTTCCTGGAACGGCGTTTCTTGTTCCACCCTACCAGCGACCAACGGTACCGAGTATCGCGTCACCTCGTTGTCGCTTCCCAATTCTCAGCTTTTCGGTTCAATTCCCTCCGATCTGGGTTCCATTGAACACCTTCAAGTCCTAGACCTTTCCAACAACTCCCTCAACGGCTCTCTTCCTTCTTCTCTCTCCCAAGCCTCCCAGCTTAGATTCCTCAACCTCTCTAACAATTTAATAACAGGGGAGGTTCCCCAGTCCATACCCCAGCTTCAGAATCTCCAATGCCTAAACCTCTCCGACAATGCTTTGGCGGGAAAACTGCCTCACGATTTCTCCAACATGCACAACCTAACTCTGGCTTCCTTCAAGAACAATTACTTGTCAGGTTTTCTTCCCAGCGGGTTGAGAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTGTTCAACGGGACTCTTCCCGCGGATTTCGGCGGAGACGCCATGCGTTACATAAACATCTCCTACAACAGATTTTTCGGCGAAATCCCGACGGAGTTCGCAGCAAACATTCCCGGGAACGCCACCGTCGACCTTTCGTTCAACAACCTCACCGGCCAAGTTCCCGACTCCGCTGTGTTTTTGAATCAGAACTGGAAATCTTTCTCCGGTAACGTCAACCTTTGTGGAGAACAAACGAAGAATGTGTGCCCTGTTCCTTCTTCGTCGTCCTCTAAACCGAAAGATTCAGCTCCTATATCTCCTCCTGCAATCGCGGCAATCCCGCGGACGTTTGATTCTTCGGCGGCGCCTAGGGGGAAAAAAGGGAGTGGTCTGAAACGAGGAACGGTAATAGGAATCGTGGTGGGAGACGTAATTGGGATAGCGATCCTTGGCATGATATTCGCGCAGGTGTACCGGTTGAAGAAAAAGAAGGAGGCGGTGAAGAAGGAGACGGTTGTGAGGAGTGGAAGTGGTAGTGAGAGTGAGAGTTCGCGGGAGTCTAGAAGGTTTATGAGGTGGTCGTGTTTGAGTAAGAGAGCGGAAGATGAAGAGTGTTCGGAGACAAGAAGCAGTTGTGATAGCGAGGTGGAGGAGCAGAAGCCTAAGGGTCCTCAACAGGAGGAGAAAACGGGGACTCTTGTGATTGTGGACGGAGAACGACAGCTTGAACTGGAAACGCTCCTGAAGGCTTCTGTGTACATATTGGGTGCGACGGGGTCCAGCATAATGTACAAGGCTGTCTTGGAAGATGGTATGTCCTTGGCGGTTCGGAGAATCGGGGAGAGCGGTGTGGAGCGGTTCAAGGACTTCCAGAACCAGGTTCGACTTATTGCTAAACTGGTGCACCCTAATCTGGTTCGCATTCGAGGCTTCTACTGGGGACACGATGAGAAACTCATCATCTATGATTTCGTTCCAAACGGTTGCCTTGCCAATGTTCGTTACAGGAAGGCGGGCACCTCGCCGACTCATTTACCGTGGGAAATCAGGCTGAAGATAGCGAAAGGGGTGGCACGTGGACTGACTTATCTCCACGAGAAGAAACACGTGCATGGAAACTTGAAGCCTAGTAATATTCTGCTGTGCAATGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGGATAGTCACCGGTGACACCAGTTATAAGGCTGGCGGATCGGCGCGTATTTTTGGGAGCAAGAGATCCACGGCCTCCCGGGACAGTTTTCAGGACATTACCTATGGGCCAAGCCCGAGCCCAAGCCCGAGCCCTAGTTCCATGATGGGCTTATCTCCTTACCATGCTCCCGAGTCGCTGAGAAACCTGAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAGCTTCTAACGGGGAAGATTGTGGTTTTGGATGATATGGGCCAAGGGCCTGGGGTTTTGACGGAGGATAAGAACCGGGTCTTGCGTATGGTTGATATGGCTATCAGGGCCGACATGGAGGGGAGAGAGGAGGCCCTGTTGGCCTACTTCAAGCTAGGGTATAGTTGTGTGTCTAGCGTTCCACTGAAAAGGCCTTCAATGAAAGAGGTGCTACAAGTTCTTGAAAAGATCTCATCCTCCTCTTCTTCCTCCTCATATTACTATAGCGTCTAA 2283 0.5085 MTLFCQPLIISLLLLLAVHHSSALTRDGVLLLSFKYAVLNDPLYVLANWNYTDQTPCSWNGVSCSTLPATNGTEYRVTSLSLPNSQLFGSIPSDLGSIEHLQVLDLSNNSLNGSLPSSLSQASQLRFLNLSNNLITGEVPQSIPQLQNLQCLNLSDNALAGKLPHDFSNMHNLTLASFKNNYLSGFLPSGLRTLQVLDLSSNLFNGTLPADFGGDAMRYINISYNRFFGEIPTEFAANIPGNATVDLSFNNLTGQVPDSAVFLNQNWKSFSGNVNLCGEQTKNVCPVPSSSSSKPKDSAPISPPAIAAIPRTFDSSAAPRGKKGSGLKRGTVIGIVVGDVIGIAILGMIFAQVYRLKKKKEAVKKETVVRSGSGSESESSRESRRFMRWSCLSKRAEDEECSETRSSCDSEVEEQKPKGPQQEEKTGTLVIVDGERQLELETLLKASVYILGATGSSIMYKAVLEDGMSLAVRRIGESGVERFKDFQNQVRLIAKLVHPNLVRIRGFYWGHDEKLIIYDFVPNGCLANVRYRKAGTSPTHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPSNILLCNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITYGPSPSPSPSPSSMMGLSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPGVLTEDKNRVLRMVDMAIRADMEGREEALLAYFKLGYSCVSSVPLKRPSMKEVLQVLEKISSSSSSSSYYYSV* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1187 760 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 750 - -
Vra7g1187 760 MobiDBLite consensus disorder prediction 611 644 - -
Vra7g1187 760 MobiDBLite consensus disorder prediction 400 427 - -
Vra7g1187 760 Gene3D Transferase(Phosphotransferase) domain 1 521 757 - -
Vra7g1187 760 ProSiteProfiles Protein kinase domain profile. 445 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1187 760 PRINTS Leucine-rich repeat signature 101 114 - -
Vra7g1187 760 PRINTS Leucine-rich repeat signature 146 159 - -
Vra7g1187 760 SMART LRR_typ_2 98 122 IPR003591 -
Vra7g1187 760 SMART LRR_typ_2 146 169 IPR003591 -
Vra7g1187 760 SMART LRR_typ_2 191 214 IPR003591 -
Vra7g1187 760 Pfam Protein kinase domain 451 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1187 760 MobiDBLite consensus disorder prediction 400 421 - -
Vra7g1187 760 MobiDBLite consensus disorder prediction 611 628 - -
Vra7g1187 760 Pfam Leucine Rich Repeat 100 120 IPR001611 GO:0005515
Vra7g1187 760 PANTHER BNAC07G16060D PROTEIN 9 750 - -
Vra7g1187 760 Gene3D Ribonuclease Inhibitor 25 191 IPR032675 -
Vra7g1187 760 Gene3D Ribonuclease Inhibitor 192 287 IPR032675 -
Vra7g1187 760 SUPERFAMILY L domain-like 28 278 - -
Vra7g1187 760 SUPERFAMILY Protein kinase-like (PK-like) 450 748 IPR011009 -
Vra7g1187 760 Gene3D Phosphorylase Kinase; domain 1 414 520 - -
Vra7g1187 760 CDD STKc_IRAK 451 747 - -
Vra7g1187 760 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1187 Vra-Chr7 28080315 28083280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1187 10 758 Receptor kinase-like Gene Family AT4G37250 56.662 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vra7g1187 Pkinase 6.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1187 - - pvu:PHAVU_003G240400g 1231.08