Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1175 ATGCAAAGGGCAACGGCAGCATTTCTCCCTCTGTTGCTACATATAATCAACCTCGCCACCACTTGCGGTGGCTCCACGGTGTCCTCCGACGCAGTGTGGTTGCTGTCGTTTAAACGGGAAGCGGACCAAGACAACAGGCTCCTCTACACTCTGAACGAGCCGTACGACTACTGCGAGTGGGAGGGCGTGAAGTGTGCACAAGGGAGAGTGGTCCGGTTCGTGGTCCAGTCCATGGGCCTGCGCGGCCCATTCCCTCCGGACACCCTGACGAAACTGGACCAGCTCCGCGTCATGAGCCTCCGCAACAACTCCCTCTACGGGCCCATCCCTGATCTCTCCTCTCTCACCAACCTCAAGTCCCTCTTCCTCGACCACAACAACTTCTCCGGTTCCTTCCCTCCTTCTCTCCTCCTCCTCCACCGCATCCTCACTCTATCCCTTTCTCACAACAATCTCTCCGGTTCGATCCCGGTTCGGCTCACTCTCCTCGACCGTCTCATTGCCCTCCGCCTCGACTCCAACAACTTCTCCGGCACGCTCCCTCCTCTCAATCAAACTGCTCTCAAACTGCTCAATGTCTCCAACAACAACCTGACCGGTCCTGTTCCCGTTACTCCGACCCTCTCTAAACTCAACGCCGCCTCCTTCTCGGGAAACCCTGGCCTATGCGGGGAGATTGTTCACCGAGAGTGTGGCTCGCGCTCCCGCTTTTTCGGCCCCGCCACGTCCACCTCCACGGCGCCGTTGAGTCAGAGCGAACAGTCTCAGGGTATTTTGGTTGTGCCTGCTTCCGCCCAAACAAAGCGTCATCGAAAGACTGGGCTGGTGGTTGTGGGCTTTGTTGTGGCTGTTGTTCTTGTGAGTGTTTTTGTTGTGTCTGTGGTTTCGCTTGTGAGAAGGAGGCAGGCGGCGGCGGGGAAAGCGGTGGTTGCGGTGGGGGGTGAGGTGGAGGCGGTTGTGGAGGAGGAGGAGAGGGAGGTGAAGGTGAGGAGGATGGAGGAGGCGCACAGGAGTGGGAAACTGGTGTTCTGCTGCGGGGAGCTGCAGCAGTATACGCTGGAGATGCTGATGCGGGCTTCGGCGGAGTTGCTGGGGAGGGGGAGCGTGGGGACGACGTACAAGGCGGTGCTGGATTCGCGGTTGATTGTGACGGTGAAGAGGTTGGATGGGGGGAAGAGTGGGGAGAGTGATGGAGTAGTGTTTGAGCGCCACATGGAGGCTGTGGGGAGGCTTCGCCACCCCAATTTGGTTCCTTTGAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTTGTCATATATGATTATCAGCCCAATGGCAGCATCTTCAACCTCGTTCACGGTTCAAGATCGGCGAGGGCGAAGCCTTTGCATTGGACATCATGCTTGAAAATAGCCGAAGATGTGGCACACGGACTTGCTTATATACATCAAGTTTCAACTCTAATTCATGGCAACCTGAAATCTTCTAACGTTCTTCTTGGGACGGGTTTTGAAGCCTGTATTACGGACTATTGCTTGTCCTTCTTTGCAGATTCTTCGTTCACTGAAGATCCTGATTCTGCGGCTTATAGAGCACCCGAGGCTCGCAACTCTAGCCGCAGAGCCACATCCAAGTCTGATGTTTATGCTTTTGGAGTGCTTCTACTAGAGCTTTTGACCGGTAAACACCCTTCCCAACAACCTTTTCTTGCACCAGCGGATTTGCAAGATTGGGTGAGAACAATGAGGGACGATGATGGCAGTGAAGACAACCGGCTAGAGATGCTCACGGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCAGCAATGTGGCAAGTCCTTAAGATGATACAGGGAATAAAGGACAGCGTTTCGATGGAGGATAATTCATTTACTGGGCTCTCTTAG 1899 0.5508 MQRATAAFLPLLLHIINLATTCGGSTVSSDAVWLLSFKREADQDNRLLYTLNEPYDYCEWEGVKCAQGRVVRFVVQSMGLRGPFPPDTLTKLDQLRVMSLRNNSLYGPIPDLSSLTNLKSLFLDHNNFSGSFPPSLLLLHRILTLSLSHNNLSGSIPVRLTLLDRLIALRLDSNNFSGTLPPLNQTALKLLNVSNNNLTGPVPVTPTLSKLNAASFSGNPGLCGEIVHRECGSRSRFFGPATSTSTAPLSQSEQSQGILVVPASAQTKRHRKTGLVVVGFVVAVVLVSVFVVSVVSLVRRRQAAAGKAVVAVGGEVEAVVEEEEREVKVRRMEEAHRSGKLVFCCGELQQYTLEMLMRASAELLGRGSVGTTYKAVLDSRLIVTVKRLDGGKSGESDGVVFERHMEAVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSIFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSTLIHGNLKSSNVLLGTGFEACITDYCLSFFADSSFTEDPDSAAYRAPEARNSSRRATSKSDVYAFGVLLLELLTGKHPSQQPFLAPADLQDWVRTMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEDNSFTGLS* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1175 632 Gene3D Ribonuclease Inhibitor 186 233 IPR032675 -
Vra7g1175 632 SUPERFAMILY Protein kinase-like (PK-like) 362 618 IPR011009 -
Vra7g1175 632 Pfam Protein kinase domain 361 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1175 632 PANTHER LRR RECEPTOR-LIKE KINASE 9 628 - -
Vra7g1175 632 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Vra7g1175 632 ProSiteProfiles Protein kinase domain profile. 358 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1175 632 Gene3D Phosphorylase Kinase; domain 1 318 435 - -
Vra7g1175 632 Gene3D Transferase(Phosphotransferase) domain 1 437 629 - -
Vra7g1175 632 SUPERFAMILY L domain-like 26 224 - -
Vra7g1175 632 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1175 Vra-Chr7 27933567 27937184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1175 19 626 Receptor kinase-like Gene Family AT3G50230 52.812 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vra7g1175 Pkinase 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1175 - - gmx:100783086 933.324