Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1167 ATGGAAAACGTTCGAGTCATCTCCAACACCACAATCAAAGCATCCGTTCCCAATAACGCTAATTCACCTCATACAGTCGATTTAACTCCCTGGGATCTCCAATTCCTCCCTACTGAAACCATCCAAAAAGGCCTTCTTTTTCGCAACGTAAAACACACACCATTCCAAATCCACCACCTCCAACACTCCCTTTCCTCCACTCTAGCATTCTTTCCACCCCTCGCAGGTCGTCTCGCCATACTCCGACATCATCACAGCATTGTCTCATCCCACATCCTATGCAACAACGCTGGAGCACTCTTTGTCCACGCCGTTGCACCCAACACCACTGTTGCACACATCCTTCAACCAAAATACGTTCCTCTCATTGTTTCCTCCTTCTTTCCAATCAACGGAGTTAAAAACTACGAGGGCACGTCGCAGCCATTGCTGGCAGTGCAAGTGACGGAGCTAGTTGACGGCATCTTCATCGCCCTAACAGTGAACCACGTCGTTGCTGACGGCAAGTCATTCTGGCATTTTGTGAATTCCTGGGCTGAAATCTCACGTGGCTCCCTTCAAATATCGAAACTTCCTTCTCTCCGCCGTTACTTCCCCGATGGCATTGACCACCCCATACACTTTCCCTTCGCAGAGGAAGAAGAAAACCAACACTCCCCAAACCTCAAACCACAAGCTCCACATGAGAGGGTATTCCATTTCACGAAGGAAAAAATTGCCGAACTCAAATCAAAAGCTAATGCAGAGGCCAACACAGACAAAATATCTTCTCTGCAAGCGCTTCTAACTCTCCTTTGGCGCGCTGTGACACGTTGCAAGCGGGTCAAGCCGCAAGAAAACGTGCATTATGTGTTGTTCATCGGCGTTTGGTCGAGGATGGTTCCAGCACTGGCAGAGGGTTATTTTGGAAACTCGGTTATAGCCAGTATTGTGACGATGAAATGTGGGGAACTATTGGAGGGTGGGATTGGAAAGGGGGCTTTAGAGATGAACAGGGTGATTTCTTTGCAGTCTGGTGAGAAGGTAAAGAAGCAGTATGAATGTTGGGTGAGAAGGCCAAGGCTTTTAACGTTGCCGAGTGGCGTGGGTGGTAGTAATTACTTGATCACTAGCAGTTCTCCAAGGTTTAAGATATTAGATAACGATTTTGGCTGGGGAAAGGCTGAAGCAGTTGGAATTGGAGGTGGGCAACATAAACGTAACGGCATGATTACTGTGTTCGGCGGAGCTGAAGAAGGGTCCATTGACATTGTAGCCACCCTTCCTTATTTGATTTTGGAGGCCATGGGAGACGACGCAGAGTTCATGGATGTTGTGTCCCACTAA 1326 0.4804 MENVRVISNTTIKASVPNNANSPHTVDLTPWDLQFLPTETIQKGLLFRNVKHTPFQIHHLQHSLSSTLAFFPPLAGRLAILRHHHSIVSSHILCNNAGALFVHAVAPNTTVAHILQPKYVPLIVSSFFPINGVKNYEGTSQPLLAVQVTELVDGIFIALTVNHVVADGKSFWHFVNSWAEISRGSLQISKLPSLRRYFPDGIDHPIHFPFAEEEENQHSPNLKPQAPHERVFHFTKEKIAELKSKANAEANTDKISSLQALLTLLWRAVTRCKRVKPQENVHYVLFIGVWSRMVPALAEGYFGNSVIASIVTMKCGELLEGGIGKGALEMNRVISLQSGEKVKKQYECWVRRPRLLTLPSGVGGSNYLITSSSPRFKILDNDFGWGKAEAVGIGGGQHKRNGMITVFGGAEEGSIDIVATLPYLILEAMGDDAEFMDVVSH* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1167 441 Gene3D - 209 429 IPR023213 -
Vra7g1167 441 Gene3D - 2 205 IPR023213 -
Vra7g1167 441 Pfam Transferase family 4 436 - -
Vra7g1167 441 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 2 438 - -
Vra7g1167 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1167 Vra-Chr7 27794367 27796020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1167 55 395 Monolignol Biosynthesis Gene Families AT5G48930 28.451 7.37e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1167 - - gmx:100797643 598.971