Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1166 ATGGAAGCCGTGGAAGTCATCAGCACCACCACAATCAAGGCACCCACTCATAGTATCCATAACTCACCTCGTAAAATCCATTTAACTCCATTGGATCTTCCATATCTCACAGTTGAATCCATCCAAAAAGGTCTTCTTTTTGGCAGCCCAAAAGACACAGCATTCCATATAAATAATCTTCAACACTCACTTTCCTCCACCCTTGACTTTTTTCCTCCCATCGCTGGTCGTCTCGTCATACTCCAACATCACGACAACATTGTCTCAACCCACATCCTTTGCAACAACGCTGGAGTCCTCTTTGTCCACGCCGTTGCACCCAACACCACTGTCGCTCACATCCTTCAATCCAAATACAACCCTCCCATCATTCGCTCCTTCTTTCCACTCAACGGCGTTAAAAACTACAAGGGCACGTCACAGCCATTGCTGGCAGTGCAGGTGACGGAGCTAGTTGATGGCATCTTCATCGCCCTAACATTCAACCACGTCGTTGCCGACGGCAAGTCGATGTGGCATTTCGTGAATTCCTGGGCTGAAATCTCACGTGGCTCCCTTCAAATATCCAAACTCCCTTCTTTCGACCGTTACTTTCCCGATGGCATTGACCACCGCATGCGCTTTCCCTTCACAAAGGAGGAAGAAACCCAACAATCCCCAAACCTCAAACAACAAATTCCGCCTGAGAGGGTCTTCCATTTCGGGAAGGAAAAAATCGCGGAACTGAAAATAAAAGCCAACGCAGAAGCCAACACAGACAAGATATCTTCTCTGCAAGCGCTTTTAACTCTACTTTGGCTCTGTGTGATTCGTTGCCGACACGTGGAGCCTGAAGAAGAGATAAGTTACGTGCTTGCGATCGGCGTTGGGCCCAGGATGGTTCCACCACTGGCAGAGGGTTATTTTGGAAACTCAGTGATGTTTGGTGTTGTGACCATGAAAGCCGGGGAACTATTGGAAGGTGGTCTTGGGAAGGGTGCTCTGGACATGAACAAGATGATTGCTTTGCACTCTCATGAGAGGGTAAAGAACCATTATGAGTCTTGGGTGAGAACTCCGAGGCTGCTTAAATTATTTGGTGGTTCACTGGCCACTAGCAGTTCTCCGAGGTTCGACTTTTACGGTAACGATTTTGGGTGGGGAAAGCCCGTGGCGGTAAGAAGTGGCGGCGCAAATAAGAGTTGCGGAAAGATTAGTGTGTTTGCAGGCGCTGAAGAAGGTTCTATCGACATTGAAGTGTGCCTTCCTTTTGAGATTTTGGAGGCACTGGAAAATGACCCTGTCTTCATGGATGCCGTTTCCAGCTAG 1308 0.4824 MEAVEVISTTTIKAPTHSIHNSPRKIHLTPLDLPYLTVESIQKGLLFGSPKDTAFHINNLQHSLSSTLDFFPPIAGRLVILQHHDNIVSTHILCNNAGVLFVHAVAPNTTVAHILQSKYNPPIIRSFFPLNGVKNYKGTSQPLLAVQVTELVDGIFIALTFNHVVADGKSMWHFVNSWAEISRGSLQISKLPSFDRYFPDGIDHRMRFPFTKEEETQQSPNLKQQIPPERVFHFGKEKIAELKIKANAEANTDKISSLQALLTLLWLCVIRCRHVEPEEEISYVLAIGVGPRMVPPLAEGYFGNSVMFGVVTMKAGELLEGGLGKGALDMNKMIALHSHERVKNHYESWVRTPRLLKLFGGSLATSSSPRFDFYGNDFGWGKPVAVRSGGANKSCGKISVFAGAEEGSIDIEVCLPFEILEALENDPVFMDAVSS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1166 435 Gene3D - 2 205 IPR023213 -
Vra7g1166 435 Pfam Transferase family 4 427 - -
Vra7g1166 435 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 432 - -
Vra7g1166 435 Gene3D - 210 425 IPR023213 -
Vra7g1166 435 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1166 Vra-Chr7 27780657 27783190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1166 55 425 Monolignol Biosynthesis Gene Families AT5G48930 26.923 2.62e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1166 - - gmx:100797643 585.104