Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1164 ATGGCTAATGAAGATGAACCCAAAAACCACCTCTTGGGCATAAGAAATCTCTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACGAATGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACACCCTTGGAACTTAATGGCTACACCACCAGACGAAGGACAATTTCTGAGCATGCTTATTAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTGTACACCGGTTACTCTCTTCTTTCCACTGCCCTAGCTCTTCCCCAAGATGGAAAGATCTTGGCTTTGGACTTGAACCGCGAATTCTATGAATTGGGTTTGCCCATCATTGAAAGAGCTGGTGTGGCTCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCTTTTCTTGACGAGCTGCTTAAAGATGAAAGTAAGAAGGGGCAGTTCGATTTTGTTTTCGTGGATGCTGATAAGAACAATTACTTGAACTATCACAAGAGAGTAATTGATCTGGTGAAGGTGGGAGGTCTGATCGGATACGACAACACCCTATGGGCTGGATCTGTGGCTGCGCCTCCTGACGCACCGATGATGGATTACGTTAAACCTCTTCGCGGCTATGTGATGGAGTTCAACAAGTACCTGTCACAAGATACAAGGATTGAGATTTGCCAGCTCCCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 741 0.4629 MANEDEPKNHLLGIRNLSHKTLLQSDALYQYILETSVYPREHECLKELREMTEKHPWNLMATPPDEGQFLSMLIKLINAKNTLEIGVYTGYSLLSTALALPQDGKILALDLNREFYELGLPIIERAGVAHKIDFREGPALPFLDELLKDESKKGQFDFVFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWAGSVAAPPDAPMMDYVKPLRGYVMEFNKYLSQDTRIEICQLPVGDGITLCRRII* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1164 246 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 5 246 - -
Vra7g1164 246 CDD AdoMet_MTases 83 185 - -
Vra7g1164 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Vra7g1164 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Vra7g1164 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Vra7g1164 246 PANTHER O-METHYLTRANSFERASE-RELATED 5 246 - -
Vra7g1164 246 Gene3D Vaccinia Virus protein VP39 11 246 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1164 Vra-Chr7 27752894 27759681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1164 4 245 Monolignol Biosynthesis Gene Families AT4G34050 73.554 7.18e-136 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1164 K00588 - gmx:100305498 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0573 11 4423579 4424957 Vra7g1164 7 27752894 27759681 PCT