Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1146 CATCCAACCACTTACTTAAATCTCATTAATGGTCCTCACCCAGTGTATGAATGCACCCCACAGCCACCACTTCCACGGAAATCAAATTGTTTTTCGTTTTCTAAAAATCACACAACACATAACCAATTCGACAAGGCCCACATAAATGACATCAAGAAGCCCAGGAGGCATCGCCACACTTCCACCAAAGGGATGAACCCCAAGTTTTTGAGGAATCAGAGGTACGCTAGGAAGCACAACAAGAAGAATAGGGAAATTGCTTCCGAAGAAGAGTAA 276 0.4348 HPTTYLNLINGPHPVYECTPQPPLPRKSNCFSFSKNHTTHNQFDKAHINDIKKPRRHRHTSTKGMNPKFLRNQRYARKHNKKNREIASEEE* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1146 91 MobiDBLite consensus disorder prediction 41 91 - -
Vra7g1146 91 Gene3D - 32 91 - -
Vra7g1146 91 PANTHER 60S RIBOSOMAL PROTEIN L29 34 91 - -
Vra7g1146 91 Pfam Ribosomal L29e protein family 34 72 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vra7g1146 91 PANTHER 60S RIBOSOMAL PROTEIN L29 34 91 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1146 Vra-Chr7 27487079 27487354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1146 31 91 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 73.770 3.37e-25 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1146 K02905 - twl:120012988 103.99