Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1127 ATGCGCTGGTTACCCACGCTTTCCTTCACGCCTTCCAGTTCCTCCTCGTCTTCCTCAGCCGCCTCCGCCGACCACCGCCGGAAGGTGTGGCTGTTCGGTAGTTCATCCAAGAAACGCTCCTGCCATGGCGAAAACGATGCCAGGTGGCACGATGACGATTCACCACCCTTCCCTTCCCCCGGCACACCTCAGCCCTTGCCCCTGCCGGAGCTCGCCGCTTCCTCCGCTGTGCTCCGTAGAGACGGCGAATGCCGTCTTCCCTCGCCCAAGGATGCTGCTGCAGCCACCACCTCCACCGGCTGTCGGATGCGGAGTGTTTTTGCTGGCCAAGACACGAGAAAGAATATGGAACAGGCTGAAACTAGGTCATGGAGAATGCTGCATCAAGATTCCTGTAGTTGTTGTGAATGTGCTCGAGATAATAGTAATACTAATAATAGTAACTTCGCGAGCATCCCTCGTAGGAGCAGTTTTTCAGGTATTCCCTTTGGAAGTCCTTCAATAGTGAGTCCTCAGAAAACAAAAAATGGTGAATCTGTGCCATATTATTATGCGAGTCCCAAAGGAAATCAATTCTGGTCTGCACCAGAAATGTCTACCTGTGAAACAGGGTTGCTACCTCCTGCCTTCTTTGATTTACCCGTGTTGGGCACAGAAACTTCTCCCTCTCCCACCTCCCATCAAAGTCCACAGAGGAGAAGTCCGGGCCAACACACCAGAACCTTGAGTGGACCTCTATCTCCTTTACATTCCAAGTTATCACTTGAAATCTCAATGGTGCGCCGTGAAAGTACTGCCCCTCCTGTCAGTGTTCACCCCTTGCCCCTGCCTCCTGGGGCTTCCCTGCCCTCTCCATCGTCAGCTAGTACATTTTCCAATGCTAGATCAGAATCATTGCCAATGAAAAACCAATGGCAGAAAGGGAAACTTATAGGGCGAGGGACATTTGGAAGTGTTTATGTTGCAACCAATAGGGAAACCGGTGCATTATGTGCAATGAAGGAAGTGGAAATGTTTCCTGATGATCCAAAATCTGCTGAGTCTATTAAACAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTAAAGCATTCAAACATCGTGCAGTATTTTGGCAGTGAAATAGTTGAGGGCCGGTTTTATATTTATCTGGAATATGTTCATCCTGGTTCAATTAATAAATACGTCCGTGATCATTGTGGTGCCATAACAGAATCTGTCATTCGGAATTTCACTCGACATATTCTATCAGGATTGGCTTATTTACATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCAAACTTGCTTGTTGACTCCGCTGGAGTAGTTAAGCTTGCTGATTTTGGGATGGCTAAGCATCTAAATGGGTTCGAAGGTAATCTATCTTTGAGGGGAAGTCCGTACTGGATGGCTCCAGAGCTTTTGCAGGCTGTGATGCAAAAGGATAACAGCCCTGATCTTGCTTTTGCTATTGATATTTGGAGTCTGGGTTGTACCATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCTGCAGCTCTGTTTAAGGTTATGAAGGAAACCCCTCCTATTCCTGAAACATTGTCGCCCGAGGGTAAAGATTTCTTGAGGTGCTGCTTTATAAGAAATCCAGCAGAGCGGCCAGCAGCTGCAGTTTTACTAGAACATCGATTTTTGAAAAACTCTCAACAGCCTGATGTTTCATCTCCCACTCAGTTGTATAATGGAACAGGCTTCATGGACAAACCACGTAGTCCCATTAAACAATTTGATAATAAACATGATCAGTTGTCAATCTCCTGTGCCAAAATTGCCAAGGTTAAAGCAGCTGACAGGCGTGGATTTCTCATTTCTTCGTTGGAAATTCTTCCTGCATCCTTGGACTAA 1908 0.4659 MRWLPTLSFTPSSSSSSSSAASADHRRKVWLFGSSSKKRSCHGENDARWHDDDSPPFPSPGTPQPLPLPELAASSAVLRRDGECRLPSPKDAAAATTSTGCRMRSVFAGQDTRKNMEQAETRSWRMLHQDSCSCCECARDNSNTNNSNFASIPRRSSFSGIPFGSPSIVSPQKTKNGESVPYYYASPKGNQFWSAPEMSTCETGLLPPAFFDLPVLGTETSPSPTSHQSPQRRSPGQHTRTLSGPLSPLHSKLSLEISMVRRESTAPPVSVHPLPLPPGASLPSPSSASTFSNARSESLPMKNQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEMFPDDPKSAESIKQLEQEIKVLSQLKHSNIVQYFGSEIVEGRFYIYLEYVHPGSINKYVRDHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLNGFEGNLSLRGSPYWMAPELLQAVMQKDNSPDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSPEGKDFLRCCFIRNPAERPAAAVLLEHRFLKNSQQPDVSSPTQLYNGTGFMDKPRSPIKQFDNKHDQLSISCAKIAKVKAADRRGFLISSLEILPASLD* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1127 635 SMART serkin_6 305 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1127 635 MobiDBLite consensus disorder prediction 39 53 - -
Vra7g1127 635 MobiDBLite consensus disorder prediction 212 248 - -
Vra7g1127 635 ProSitePatterns Protein kinases ATP-binding region signature. 311 334 IPR017441 GO:0005524
Vra7g1127 635 MobiDBLite consensus disorder prediction 1 23 - -
Vra7g1127 635 ProSiteProfiles Protein kinase domain profile. 305 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1127 635 MobiDBLite consensus disorder prediction 264 298 - -
Vra7g1127 635 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 613 - -
Vra7g1127 635 SUPERFAMILY Protein kinase-like (PK-like) 294 583 IPR011009 -
Vra7g1127 635 MobiDBLite consensus disorder prediction 218 248 - -
Vra7g1127 635 Gene3D Transferase(Phosphotransferase) domain 1 301 602 - -
Vra7g1127 635 MobiDBLite consensus disorder prediction 283 298 - -
Vra7g1127 635 MobiDBLite consensus disorder prediction 1 69 - -
Vra7g1127 635 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 613 - -
Vra7g1127 635 Pfam Protein kinase domain 306 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1127 Vra-Chr7 27157748 27163033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1127 89 604 MAP Kinase Kinase Kinase AT5G66850 57.827 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vra7g1127 Pkinase 4.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1127 - - gmx:100790701 943.34