Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1120 ATGGCACTAAGTGGTAGGCATTTTTGGATCATCTTCATCGTTTTTGAATTAGCACCCTTCTTTCCTCTCTCTTATGCCGCTTCTGACTTAGAATTGCTCCTCAAAATGAAAGAAAGTTTAGAAAACTACGGTTCCTCCTTGGACTCCTGGAACTCTACCACTCCTCCTTGCACCGATGGCCATGCCAACTGGCATGGCATTCTTTGCTACCAAGGAAAAGTGTGGGGCGTTAAGCTTGAGAACATGGGGCTCCAAGGCCTCATTGACATAGATTCTTTAAAGGCCTTGCCTTACCTAAGAACCTTGAGTTTCATGAACAACAGTTTGGAGGGTCCATGGCCAGAAATTCACCACTTGGTTGGTCTCAAGTCTGTTTACCTTTCCAATAACAAGTTTTCTGGGGAGATTCCTTATAGAGCCTTCGAGGGGTTGAAGTGGTTGAAGAAAATTTATCTGTCCAACAACCAATTCTCCGGTTACGTTCCAACTTCGCTCACGGTGTTGCCCAGACTCATAGAGCTCAGGTTGGACGGGAATGAGTTCACTGGTCCCATTCCACGTTTTCATCCCCGCAACAGATTGAGATTGTTTAATGTTGCTAATAATCAGTTGCAGGGTCAGATTCCTTCCACCGTTAGTAGAATGCCGGCTTCTTCCTTTTCTGGTAATGAAAGGTTATGTGGAGACCCATTGGAGTCATGCATCTCGAAGCCCTCCACTGCGAGCATCGTTGGGGCAGTGGTGGTTGTTTGCATGGCGGTGCTTGTGATTGGAATAGTAGTGCTCATGATTCACAGAAAACAGAACGGAGCGTGTGGAGCGAAATTGGGGAATCCACCCGGCAGCATCAGCAAAGGGCGTTTGAGGGACGTGGGTGATGAGAGCCGCAGGTCCGCAGGGTCAATGAGCTCCACAGACACCAGAAAAGCTGAACACTTGAGACTCTCTTTTCTGAGAGATGACAGAGAAATGTTTGACCTGCAAGAGTTGCTGAGAGCTTCTGCTGAGATTTTGGGAAGTGGCTGCTTCAGCTCTTCATACAAGGCTGCTTTGGTGAATGGGCCAACAATAGTGGTGAAGAGGTTCAAGCAGATGAACAATGTGGGGAAGGAAGAGTTCCAAGATCACATGAGAAGGCTAGGGAGGTTGAGTCATCCTAATTTGCTTCCTCCAGTGGCTTACTATTACAGAAGAGAAGAGAAGCTCGTGGTCACAGACTATGTTCAGAATGGAAGTCTCGCTGTTCGCCTTCATGGGCACCAAGCCCTGGGAGAACCAAGCCTTGAGTGGCCAATCCGGTTGAAGATTGTGAAAGGCATAGCAAAAGGTCTTGAATATCTATACAGGGACATGCCAAGCCTAATTGCCCCACATGGAAATCTGAAGTCTTCTAACGTTCTGTTGAGCCAATCTTTTGAGCCTCTTCTGACAGACTATGGCCTAGTTCCAATGATAAACCAGGAATTGGCTCAGGACATCATGGTGATATACAAGTCTCCTGAGTATTTGCAACAAGGAAGGATCACAAAGAAGACTGATGTGTGGTGTCTTGGAATACTGATTCTGGAGATCCTAACTGGGAAGTTCCCAGCAAACTTTTTGCAAAAGGGTAAAGGGAGTGAGGTGAGTTTGGCAAGTTGGGTGGATTCAGTGGTGCCAGAAGAGTGGACCAATGCTGTGTTTGATCAAGAAATGGGGGCAACTAAGAACAGTGAAGGAGAGATGGGGAAGCTTTTGAAGATTGCTTTGAATTGTTGTGAGGCGGATGTGGATAAGAGGTGGGATTTAAAGGAAGCTGTAGAGAATATTCTTGAGGTGAAGCAAAGGGATGGTGATCAAGAAAATTTTTTAACTTCTTATGCTAGTGATGCAGAATTGATTTCTTCAACTTAA 1893 0.4601 MALSGRHFWIIFIVFELAPFFPLSYAASDLELLLKMKESLENYGSSLDSWNSTTPPCTDGHANWHGILCYQGKVWGVKLENMGLQGLIDIDSLKALPYLRTLSFMNNSLEGPWPEIHHLVGLKSVYLSNNKFSGEIPYRAFEGLKWLKKIYLSNNQFSGYVPTSLTVLPRLIELRLDGNEFTGPIPRFHPRNRLRLFNVANNQLQGQIPSTVSRMPASSFSGNERLCGDPLESCISKPSTASIVGAVVVVCMAVLVIGIVVLMIHRKQNGACGAKLGNPPGSISKGRLRDVGDESRRSAGSMSSTDTRKAEHLRLSFLRDDREMFDLQELLRASAEILGSGCFSSSYKAALVNGPTIVVKRFKQMNNVGKEEFQDHMRRLGRLSHPNLLPPVAYYYRREEKLVVTDYVQNGSLAVRLHGHQALGEPSLEWPIRLKIVKGIAKGLEYLYRDMPSLIAPHGNLKSSNVLLSQSFEPLLTDYGLVPMINQELAQDIMVIYKSPEYLQQGRITKKTDVWCLGILILEILTGKFPANFLQKGKGSEVSLASWVDSVVPEEWTNAVFDQEMGATKNSEGEMGKLLKIALNCCEADVDKRWDLKEAVENILEVKQRDGDQENFLTSYASDAELISST* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1120 630 Gene3D Ribonuclease Inhibitor 194 234 IPR032675 -
Vra7g1120 630 SUPERFAMILY Protein kinase-like (PK-like) 336 604 IPR011009 -
Vra7g1120 630 Pfam Protein tyrosine and serine/threonine kinase 336 602 IPR001245 GO:0004672|GO:0006468
Vra7g1120 630 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 620 - -
Vra7g1120 630 Gene3D Phosphorylase Kinase; domain 1 297 407 - -
Vra7g1120 630 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Vra7g1120 630 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Vra7g1120 630 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Vra7g1120 630 PANTHER LRR RECEPTOR-LIKE KINASE 8 620 - -
Vra7g1120 630 Gene3D Transferase(Phosphotransferase) domain 1 408 617 - -
Vra7g1120 630 ProSiteProfiles Protein kinase domain profile. 332 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1120 630 SUPERFAMILY L domain-like 54 216 - -
Vra7g1120 630 MobiDBLite consensus disorder prediction 274 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1120 Vra-Chr7 27078891 27081370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1120 24 629 Receptor kinase-like Gene Family AT5G35390 52.830 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vra7g1120 PK_Tyr_Ser-Thr 4.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1120 - - gmx:100804368 983.015