Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1119 ATGGAAGAGACAGCACAAGAAATCAAGCGTCCATTTGGAATTCCTGAAAAGCCAGAATTCACTGTTGGTTTGGATGTACCATTGAAGAAGTTGAAACTGAATGTTCTGAGTGAAGGTTCGTCCGTAATTGTGTTGACCGGTTTGGGAGGATCGGGGAAAACCACTCTGGCCACAGTGCTCTGTTGGGATGAACAAGTCCTGGGTAAATTCAAGGAAAATATTTTATTTGTCACCTTCTCAAAAGCGCCCCAGTTGAAAATTATCGTAGAAAGACTGTTGGAGCACTTTGGATATCAAGTGCCAGAGCTTCAAAGCGATGGAGATGCTATTGATCAATTGGTACTTTTGCTGAGGAAAATTAATGCAAATCCAATGTTGTTAGTCCTGGATGATGTTTGGCCTTGCTCAGAAGCCGTTGTTGAGAAACTTAAATTTCAGATATCAGATTATAAAATTTTGGTCACCTCAAGGATTGCATTTCCTAGATTTGGAACTTCACTCGTCTTAAAACCTCTTGTTCCTGAAGATGCAATAACCCTTTTCCGACACCATGCTTTCTTGAAAAGAGCAAGTTCAAATATTCCTGAGGAAGATCTTGTCCAAAAGGTGGTGAGACATTGCAAGGGTTTACCGCTTGCCATTAAAGTGATTGGAAGATCACTGAGTCAACAGTCTATCGAGTTGTGGCAAAAGATGGTGGAGGAGTTGTCAGAAGGTCATTGTATACTTGATTCCAACTCTGAATTACTTAGTTCCCTCCAAAAGATCTTGGATGTATTGGAAGATAATCCCATCATCAAAGAGTGCTTCATGGACTTAGCTTTATTTCCTGAACACCAAAGAATTCCTGTTGCTGCTCTTGTTGATATGTGGGTTGAGTTGTATGGACTAGATAATTATGGCATCAAAGCAATTGCCATTGTCAACAGATTGGATTCCATGAATTTAGCAAATGTCACTGTAACAAGGAAAAATTCAAATGACACGGACAGTTATTACTATAACAACCATTTCATCGTCCTTCATGATATTCTAAGAGACTTGGCAATTTATCAAAGCAACAAGGCTCAAATTGAACTAAGAAAAAGACTGATGATTGGCATCAATGAAACTAAACCTGAAGTGTGTCTTGGAGAGAAGCAGCATGGCAGGATGATCCGCACATTGTCAAATAATTTTAGACTGTGTGATAAACAGAAAACCCAAAAGATACCTGTCGGAACATTGTCTATATCATCTGATGAAACTTGCACTTCATATTGGTCGCACCTACGACCAGCTCAAGCTGAGGTTCTCATCTTAAACATTCCAACTAATCAGTACTCCATTCCAAAGTACCTGAAAGAAATGAGCAAACTAAAAGTTCTGATAGTCATGAATTATGGTTTCCATCCCTGTGAATTGTTCGATTTTGAGCTACTTGGCACATTATCACTCCTAAAAAGATTGAGACTGGAGAGGATTTCGATTCCTTCCTTTGTCACATTGAAGAATCTTAAAAAGTTATCCCTCTACTTGTGTGATACACGCGAGGCTTTCGAAAACAGTAACATTCTAATTTCAGACGCTTTTCCAAATCTAGAGGACTTGAATATTGAGTATAGCAAAGAGATGGTTGGACTGCCCAAGGGACTGTGTAATATCACCTCCTTGAATGTGCTCAGCATCAGTAACTGCCATAAGCTTTCAGCATTGCCTCAAGAAATTGGAAACTTGGAGAATCTGAAACTTCTGAGACTAAGCTCATGTACTGATTTGCAAGTGATACCAAATTCTGTCGGAAGGCTTTCAAATCTACGGCATATGGACATCTCAAACTGCATAAACCTTCCTAATTTACCAGAGGAATTTGGTAATCTATGTAATCTAAGAACTCTCTACATGACAAGTTGTGAAAGGTGTGAACTGCCATCCTCAATCATCAATCTTAAGAATTTAAAGGAGGTGGTATGCGATGAAGAGACGGCTTTTTCATGGGAAGCTTTCAAACCTATGCTTCCAAATCTTAAGATAGATGTTCCTCAACTTGATATAAACTTGAATTGGCTTCATGCAATTCACTCCTAA 2067 0.3909 MEETAQEIKRPFGIPEKPEFTVGLDVPLKKLKLNVLSEGSSVIVLTGLGGSGKTTLATVLCWDEQVLGKFKENILFVTFSKAPQLKIIVERLLEHFGYQVPELQSDGDAIDQLVLLLRKINANPMLLVLDDVWPCSEAVVEKLKFQISDYKILVTSRIAFPRFGTSLVLKPLVPEDAITLFRHHAFLKRASSNIPEEDLVQKVVRHCKGLPLAIKVIGRSLSQQSIELWQKMVEELSEGHCILDSNSELLSSLQKILDVLEDNPIIKECFMDLALFPEHQRIPVAALVDMWVELYGLDNYGIKAIAIVNRLDSMNLANVTVTRKNSNDTDSYYYNNHFIVLHDILRDLAIYQSNKAQIELRKRLMIGINETKPEVCLGEKQHGRMIRTLSNNFRLCDKQKTQKIPVGTLSISSDETCTSYWSHLRPAQAEVLILNIPTNQYSIPKYLKEMSKLKVLIVMNYGFHPCELFDFELLGTLSLLKRLRLERISIPSFVTLKNLKKLSLYLCDTREAFENSNILISDAFPNLEDLNIEYSKEMVGLPKGLCNITSLNVLSISNCHKLSALPQEIGNLENLKLLRLSSCTDLQVIPNSVGRLSNLRHMDISNCINLPNLPEEFGNLCNLRTLYMTSCERCELPSSIINLKNLKEVVCDEETAFSWEAFKPMLPNLKIDVPQLDINLNWLHAIHS* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1119 688 PRINTS Disease resistance protein signature 42 57 - -
Vra7g1119 688 PRINTS Disease resistance protein signature 119 133 - -
Vra7g1119 688 PRINTS Disease resistance protein signature 207 221 - -
Vra7g1119 688 PRINTS Disease resistance protein signature 570 586 - -
Vra7g1119 688 SUPERFAMILY RNI-like 441 684 - -
Vra7g1119 688 Gene3D - 172 254 IPR042197 -
Vra7g1119 688 Gene3D Ribonuclease Inhibitor 403 686 IPR032675 -
Vra7g1119 688 Gene3D - 1 160 IPR027417 -
Vra7g1119 688 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 19 674 IPR039203 GO:0050832
Vra7g1119 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 273 IPR027417 -
Vra7g1119 688 Gene3D - 255 350 IPR036388 -
Vra7g1119 688 CDD ABC_ATPase 20 132 - -
Vra7g1119 688 Pfam NB-ARC domain 39 257 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1119 Vra-Chr7 27069079 27072741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1119 542 654 Receptor kinase-like Gene Family AT5G27060 35.088 1.87e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1119 - - pvu:PHAVU_003G247400g 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0610 11 4825714 4830050 Vra7g1119 7 27069079 27072741 PCT