Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1117 ATGGACCAGACCACGCAGCGCGTTGTACTTCCAACACTATTTCAAGAGAGATTGAGGATGGTATCGGAAATAGTTGAAAAAGGTAAAAGTAGTGATAGCAACAAGCAGATACTGAGGTCAACGCTCAAGGATATGAACCCTGTGGTGCAAGAGATCAAGCAATACAATGAACACTTAAATCCACCCAGAGAAGAAATCAAAACCCTTATTTCAGAAAAAGATGCGAAAGAAGAGCCCAAAAAATTTTGTTTGGACAAGTGTCTCTTTTGGTTTCTGTGCAGATTTGGACACAAGAGGGATGGTTCATTTGCTGGTGGTGACAAGGAAGCTCTTGTGGCAAAAGATATTGAAGAGAAACTGTACAAAGTTAGGGAAATTCTTGAGCTTCTCAGCAAAGAGAATTTTGAGCAGAAGGTTGGTGGTGTTGGAGGACCTATCAGGTTTCCTTTTGGTGTTCCTGATAACCCAGATTTCACTGTTGGCTTGGATGTGCCGTTGAGCAAGTTGAAGATGGAGGTTCTCAGAGATGGTGTGTCTGTTATTATGCTGACTGGTTTGGGTGGAATGGGGAAAACCACTCTTGCTACAAAGCTCTGTTGGGATGAACAAGTCAAGGGTAAATTTGGGGGAAATATTTTATTTGTCACCGTCTCAAAAACAGCCAAGTTGAAGATTATTGTAGAGAGATTATTTCAACACTGTGGATATGAAGTACCCGATTTTCTAAGTGATGAAGATGCAGCTAATCAATTGGGACTTTTGCTAAGGCAAATTGGTAGAAGTTCAATGTTGTTGGTACTGGATGATGTTTGGCCTGGCTCAGAAGCCCTTGTCGAGAAATTTAAAGTCCAGATACCAGATTATAAAATTTTGGTGATTTCTAGGGTTGCATTGCTTAGATCGGACATGCAGTGTATCTTAAAACCACTTGGTCATGATGATGCAGAAACTCTTTTCCGACATTATACGCACTTGGAAGAAAGTGGTGCAAGTATTCCTGATGAAGTCATCCAAAAGGTTGTGAGAAACTGCAAGGGTTTACCGCTTGCCATCAAAGTAGTTGGGAGATCACTCTGTAATCAGCGTTCTGAATTGTGGCTACAGATGATGGAGGAATTGTCCCAAGGTCGTTCTATACTTGATTCTAATGTTGAACTAATTACGTGCCTCCAAAAGATATTGGATGTTTTGGAAGATAATCTTGCCATCAAAGGGTGCTTCATGGACCTAGGTTTATTTCCTGAAGAACAAAGAATTCCTGTTACTGCTCTCATTGACATGTGGGCAGAGTTGTATAGACTAGATGATGACGGCAAAGAGGCAATGGCCATCATTAACAAATTAGACTCCATGAATCTAGCTAATGTCATGGTAGCCAGGAAAAATGCTACTAACACAGACAGTTACTACTACAATAACCACTTCATCGTTCTTCATGACCTTCTGAGAGAGCTTGCAATTTATCAGTGCTCCCAGGAACCAATGGAACAGAGAAAAAGATTGATTATTGAGATAAATCAAAATAAACATGGGGAGAAGACAAAATTTCTTAGCTGGTGTGTTAAACAGAAGCCCCAACAAGTCACTGCCCACACATTGTCTATATCAACTGATGAAAATTTCCCTTCAGATTGGCCCCAAATGCAACTAGCTCAAGTTGAGGTTCTAATTTTTAATCTTCAAACTAAGCAGTATTCCTTTCCAGATTGCATGGAAGGTATGAACAAACTAAAAGTTCTGATAGTCACAAATTACAGTTACTATCCTTCTGAAATCAACAACTTTGAGCTACTTGGCTCTTCATCCAACCTGAGAAGAATCAGATTAGAGCGGATTTCTGTTCCTTCCTTTGTTGCAATGAAGAATCTTAAAAAGTTATCCCTCTACTTTTGTAATATGAAACAAGCATTTCAAAACAAGGACCTGCTAATTTCATACGCTTTTCCAAATCTTGAAGATTTGAATATTGACTATTGCAAGGATATGGTGGGATTCCCTAAGGGGCTCTGTGATATCATCTCCCTGAAGAAGCTCAGTATTACTAATTGCCACAAACTCTCTGCATTGCCGCAAGATATTGGAAAATTGGAGAATTTGGAACTCCTAAGGCTCAGTTCTTGTACCGATTTAGAAGGGATACCTGATTCTATTGGAAGACTTTCAAATCTACGACTTCTTGACATCTCAAATTGCATAGGCCTTCCGAATTTACCGGATGACTTTGGTAATCTGTCTAATCTGCAAAATCTTTACATGACAAGTTGTGCAAGGTGTGAATTACCATTGTCAGTCACTAATCTTGGGAATTTAAAGGTGGTGATATGTGATGAAGAGACAGCAGCTTCTTGGGAAAATTTCAAACCAATGCTTCCCAATTTAAGGATAGATGTTTCTCAAGTTGATGTTAACTTGAATTGGCTTCATACAACTTTCTCCTAA 2439 0.3944 MDQTTQRVVLPTLFQERLRMVSEIVEKGKSSDSNKQILRSTLKDMNPVVQEIKQYNEHLNPPREEIKTLISEKDAKEEPKKFCLDKCLFWFLCRFGHKRDGSFAGGDKEALVAKDIEEKLYKVREILELLSKENFEQKVGGVGGPIRFPFGVPDNPDFTVGLDVPLSKLKMEVLRDGVSVIMLTGLGGMGKTTLATKLCWDEQVKGKFGGNILFVTVSKTAKLKIIVERLFQHCGYEVPDFLSDEDAANQLGLLLRQIGRSSMLLVLDDVWPGSEALVEKFKVQIPDYKILVISRVALLRSDMQCILKPLGHDDAETLFRHYTHLEESGASIPDEVIQKVVRNCKGLPLAIKVVGRSLCNQRSELWLQMMEELSQGRSILDSNVELITCLQKILDVLEDNLAIKGCFMDLGLFPEEQRIPVTALIDMWAELYRLDDDGKEAMAIINKLDSMNLANVMVARKNATNTDSYYYNNHFIVLHDLLRELAIYQCSQEPMEQRKRLIIEINQNKHGEKTKFLSWCVKQKPQQVTAHTLSISTDENFPSDWPQMQLAQVEVLIFNLQTKQYSFPDCMEGMNKLKVLIVTNYSYYPSEINNFELLGSSSNLRRIRLERISVPSFVAMKNLKKLSLYFCNMKQAFQNKDLLISYAFPNLEDLNIDYCKDMVGFPKGLCDIISLKKLSITNCHKLSALPQDIGKLENLELLRLSSCTDLEGIPDSIGRLSNLRLLDISNCIGLPNLPDDFGNLSNLQNLYMTSCARCELPLSVTNLGNLKVVICDEETAASWENFKPMLPNLRIDVSQVDVNLNWLHTTFS* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1117 812 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 11 71 IPR008808 -
Vra7g1117 812 Gene3D Ribonuclease Inhibitor 488 790 IPR032675 -
Vra7g1117 812 SUPERFAMILY RNI-like 563 775 - -
Vra7g1117 812 Pfam NB-ARC domain 175 377 IPR002182 GO:0043531
Vra7g1117 812 Gene3D - 146 305 IPR027417 -
Vra7g1117 812 Gene3D - 389 487 IPR036388 -
Vra7g1117 812 Gene3D - 310 386 IPR042197 -
Vra7g1117 812 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 7 798 IPR039203 GO:0050832
Vra7g1117 812 PRINTS Disease resistance protein signature 180 195 - -
Vra7g1117 812 PRINTS Disease resistance protein signature 257 271 - -
Vra7g1117 812 PRINTS Disease resistance protein signature 344 358 - -
Vra7g1117 812 PRINTS Disease resistance protein signature 718 734 - -
Vra7g1117 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 410 IPR027417 -
Vra7g1117 812 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1117 Vra-Chr7 27048575 27053187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1117 566 767 WRKY Transcription Factor Family AT4G12020 28.571 1.17e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1117 - - gmx:100809435 1244.18