Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1098 ATGTTCCACCGCAGCACAAAGTTCGCACTGCTTCTCACCATCTTCCTTTTCTGTTCAACCATCGCCCCAACCAGTAGCAGCTGCCAGCCCAGTTGCGGACAACATTCCCTAAAATACCCTTTTGGGTTCTGTTCTGACAGCAAAGTCAAACTAAACTGCAGCAGCGACAGTTCGAAAGTCAAAATCGGCGAGTTCGAGGTTCAGAATATAACCTCTGATAGCATATTCGTGAGTCTTCCGGTGAAGTGCAACCGCAGCTTGGGAGTCATAGACCCTCTTTTCGGTGGCAACTTTGCTCCTACGTTCAACAATAGCTTTCTGTTGCAGGGTTGCAAGTCCAAACAGAATGGCTGCGATATTACCCCATCGAGTTTCGTTGGCGAGCACGGCCCAGTGGAGGGGTGTGACTGGAAAAGCAAAAGTGAAGATGTTATTTGCTTCAAGCGGTTGCCGCGTGATAATAGTTCGCGTGAAGATGTGCTCCCGAGTGATTTGAAAGGAATTGGGTGCAGCTTCCTGTTTTCTGCCATTGCTTATGATAAGAATAAAGGAAAAGAGCTTTCGTTCCAATTACAGATGCTTGAGTTGGGGTGGTGGCTCAAAGGGCCGTGTAATTGCTCCAACAATGCATCCTGCACGGTGGTCAAGCTTGCCACAGGAGATCGAGGTTACCGGTGCCGGTGCCATGAAGGTTTCGTAGGCGACGGTTTCAAAGACGGCGATGGCTGCCGGAGTACCTTTTCAGCAGTTCCTCAATGCAAACCTTCAACACTATGGCCTGGCAGATGTAGAAAAGCAATCAAAATCGGTGTCCTTGTTGGAGGGGTGATAATTGTGGCTACCCTGGTGGTTGCTCTGTCTCTTGTATGTTACTTTACTAGGCGTCGTTCCTCTTGGCTGAGAAAACAAGTTACAGTAAAGCGGTTATTACGAGAAGCTGCGGGCGACTCTACTGTTCCTCTATATCCCTACAAAGAAATAGAAAGAGCCACAAGTTTTTTTGATGAAAAACATAGGCTTGGAACTGGGGCATTTGGCACAGTTTATGCTGGACACCTTCACAACGATGAGTGTGTTGCTATAAAAAAGATTAAGTATAGAGACACCAATAGTGTTGACCAAGTCATAAACGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAACTTAGTGCGCCTCCTAGGTTGCTGCATAGAAGGGGGAGAACAGATACTTGTGTATGAGTATATGCCCAATGGAACACTATCTGAACATTTGCAAAGGGAGAGGGGCGGAATACTTCCATGGACAATAAGACTCACCATTGCTACAGAAACTGCTAATGCTATAGCATATCTCCATTCTGCCATTAACCCACCGATATATCACAGAGACATAAAATCCAGCAACATACTCTTGGACTACAGTTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGAATGTCAGAAACATCACATATCTCAACCGCCCCACAAGGGACCCCGGGCTATGTTGATCCCCAATACCACCAGAACTTTCACCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCAATGAAAGTGGTTGATTTTTCGCGACCTACAAGTGAAATCAATTTGGCTGCACTTGCAGTTGAAAGGATTAGGAGGGGTTGTCTCGATGATATCATTGATCCCTTCCTTGAGCCACATAGGGATGCTTGGACACTCTATTCTGTTCACAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACCATGATTGAAGTGGCTGAGGAGCTTGAAGTTATCAGACGCAGTGAGTGGGAAGCTTTGGAGGAAACCATATGCACAGCTTCATCGATTGGGTCCGTTTGTTCATCGCCTCGAATAGGAAGAGAGAATTCATTGGTTGGTGTTAGTTTTGAGAGAGTTGCAGGGCAAGGGAGTGAGACATTGATTGTTCCACCCAAGAGTGAAATGTTTTTGCAATCAATGAAGGAAGTGAAGGACAACTCTCCTGTATCTGTGCATGATGCTTGGCTCAGTGGAACTAGCTCACCTTCAACAAATTGCTAG 2094 0.458 MFHRSTKFALLLTIFLFCSTIAPTSSSCQPSCGQHSLKYPFGFCSDSKVKLNCSSDSSKVKIGEFEVQNITSDSIFVSLPVKCNRSLGVIDPLFGGNFAPTFNNSFLLQGCKSKQNGCDITPSSFVGEHGPVEGCDWKSKSEDVICFKRLPRDNSSREDVLPSDLKGIGCSFLFSAIAYDKNKGKELSFQLQMLELGWWLKGPCNCSNNASCTVVKLATGDRGYRCRCHEGFVGDGFKDGDGCRSTFSAVPQCKPSTLWPGRCRKAIKIGVLVGGVIIVATLVVALSLVCYFTRRRSSWLRKQVTVKRLLREAAGDSTVPLYPYKEIERATSFFDEKHRLGTGAFGTVYAGHLHNDECVAIKKIKYRDTNSVDQVINEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEYMPNGTLSEHLQRERGGILPWTIRLTIATETANAIAYLHSAINPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFSRPTSEINLAALAVERIRRGCLDDIIDPFLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMIEVAEELEVIRRSEWEALEETICTASSIGSVCSSPRIGRENSLVGVSFERVAGQGSETLIVPPKSEMFLQSMKEVKDNSPVSVHDAWLSGTSSPSTNC* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1098 697 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 13 682 - -
Vra7g1098 697 SUPERFAMILY Protein kinase-like (PK-like) 317 608 IPR011009 -
Vra7g1098 697 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Vra7g1098 697 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Vra7g1098 697 Gene3D Transferase(Phosphotransferase) domain 1 410 627 - -
Vra7g1098 697 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 13 682 IPR045274 GO:0007166
Vra7g1098 697 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Vra7g1098 697 Pfam Protein kinase domain 335 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1098 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Vra7g1098 697 ProSiteProfiles Protein kinase domain profile. 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1098 697 Gene3D Laminin 200 239 - -
Vra7g1098 697 SMART serkin_6 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1098 Vra-Chr7 26712728 26717469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1098 8 696 Receptor kinase-like Gene Family AT2G23450 54.232 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vra7g1098 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1098 - - gmx:100810861 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0626 11 4950775 4955339 Vra7g1098 7 26712728 26717469 PCT