Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1074 ATGACGTTAGGCTTCCACATAAACAAGAAGCTTCTAGAAGAAGTGACGATCATCCCCTCAGAGAGACTTCGAAACAAGATCATAGGCTTCTCCACTCATCCCATGAAGTACATTCAAAAAGGTGTTGTTCATGGCATCTCGCTCAAGCTACAGGAGGAGGAGCACGACCAACGCATGGGCTTCGTCTCCAAGGTCTCCACCATCAACAACGATCACATCGATGTCGACAAGGAAACCCTCGAAATGCTCCACTCCCTCGGAATCAGTGACATCCCTAACATTGCCAAGCTTGATCCTGTCATTTTTCAACCCAGCTTCCTCTTCACTAGGAGATATTGA 339 0.472 MTLGFHINKKLLEEVTIIPSERLRNKIIGFSTHPMKYIQKGVVHGISLKLQEEEHDQRMGFVSKVSTINNDHIDVDKETLEMLHSLGISDIPNIAKLDPVIFQPSFLFTRRY* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1074 112 SUPERFAMILY Rps17e-like 2 39 IPR036401 GO:0003735|GO:0005840|GO:0006412
Vra7g1074 112 Pfam Ribosomal S17 1 96 IPR001210 GO:0003735|GO:0005840|GO:0006412
Vra7g1074 112 Gene3D - 1 39 IPR036401 GO:0003735|GO:0005840|GO:0006412
Vra7g1074 112 PANTHER 40S RIBOSOMAL PROTEIN S17 1 110 IPR001210 GO:0003735|GO:0005840|GO:0006412
Vra7g1074 112 PANTHER 40S RIBOSOMAL PROTEIN S17 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1074 Vra-Chr7 26283339 26283677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1074 1 99 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 69.697 2.85e-44 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1074 K02962 - gmx:100500063 163.31