Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1065 ATGATGGAGATGAGTATGTTGGCTCCTTCCTTCCCTGGCTTCGCTAAACCCTCTGCAACTGTAAAACCTTCTCTTCTTACGCTCAGGGCATCTTCTCTGCGCCATGACTACCCACTTGCGAGCAAAATTGTTGTTAAAAATTTACCATATTCTACTGGTGAGACTACTTTGCAAAAGGAATTTTCTAATTTTGGAAAGATAGCTGAAGTTAAAATGGTTAAAGATATGAAAACAAAAAGATCCAAGGGTATTGCTTTCATTCAATATACATGCCAAGATGATGCCATGCTTGCACTAGAAACCATGGATCAGAAGGATTTTTATGGTCGAACAATCTATGTGGAAATTGCTAGATTGGGTTGGGATTATTTTGGTGCAACCCCAAGGGCCTCAGGACCCCCAAAGAAGTGGGATTTGCCAGAGCAAGAAGAAGTGGTAGATTGTTGGTACTGA 453 0.4106 MMEMSMLAPSFPGFAKPSATVKPSLLTLRASSLRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDMKTKRSKGIAFIQYTCQDDAMLALETMDQKDFYGRTIYVEIARLGWDYFGATPRASGPPKKWDLPEQEEVVDCWY* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1065 150 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 19 144 - -
Vra7g1065 150 SMART rrm1_1 42 115 IPR000504 GO:0003723
Vra7g1065 150 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 19 144 - -
Vra7g1065 150 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 112 IPR000504 GO:0003723
Vra7g1065 150 Gene3D - 29 142 IPR012677 -
Vra7g1065 150 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
Vra7g1065 150 SUPERFAMILY RNA-binding domain, RBD 40 120 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1065 41 122 Eukaryotic Initiation Factors Gene Family AT2G36660 36.585 2.76e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1065 - K13195 gmx:100305971 276.944