Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1050 ATGAAGGGCAGTGGCTGCAGTGAAGCATCATCTGGTGGAGGAAACATGAATGTGAAACCTGCATGGCTAGAGAAGCTTATGGCTGAGACATTCTTTGGCAACTGTGGGGTCCACCAGAATCAAAAGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTACCTTAGCATCTGCCCCCACTGTCTCCCTTCTCACCGTTCCCATTCTCTTCTCCAGGTGAGAAGGTATGTGTACCATGACGTGGTTCGATTGGGTGATCTAGAAAAGCTCGTCGATTGCGCCAATATTCAGCCATACACCATTAACGGTGCCAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATTTAAAGGCACTGCCAACACTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGTTCTCTGTCATGCAAGTTTGAGGGTCTAAGTGTTGATTGCTATACCCAATTTGTCCCCACTTCCTCTGAGGCTACCACTAGCATGGCCAACAACAACAACAAGCAGAACACAAATGGCTTCTTCATCTCTCTTGGAAGCAGAAGAAAGGGGGCTCCCCATAGAGCTCCTCTTTCCTAG 594 0.4747 MKGSGCSEASSGGGNMNVKPAWLEKLMAETFFGNCGVHQNQKKNEKNVFCLHCYLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLEKLVDCANIQPYTINGAKVIFLNQRPQSRSFKGTANTCCTCDRILQEPFHFCSLSCKFEGLSVDCYTQFVPTSSEATTSMANNNNKQNTNGFFISLGSRRKGAPHRAPLS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1050 197 PANTHER OS02G0172800 PROTEIN 17 148 - -
Vra7g1050 197 Pfam PLATZ transcription factor 74 144 IPR006734 -
Vra7g1050 197 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1050 Vra-Chr7 25745082 25748854 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra7g1050 PLATZ 5.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1050 - - vun:114179785 393.66