Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1028 ATGCCAATGGCTTCGACTCTCACAATAGTTAGAAATCCCATCTTCCTTACTCACCATTACCAACTCAACAAGCACTTCAAAACACCTTCTTCCTTACGCCTCCTCAGTTTCGCAAAGATGGAAGGAAGTGAGATTAGTGAGGAAGTGGGGGAGGATTCGAGAGCGAAGAGGAAAATTTTTGTTGCTGGAGCCACTGGTAGCACTGGGAAAAGAATCGTTGAGCAGTTATTGGCAAAGGGTTTTTCTGTTAAGGCTGGGGTTAGGGATTTGGACAAGGCCAAGTCCACCCTTTCCTCTGCCAACCCATCTCTTCAAATTGTAAAAGCTGATGTCACAGAGGGGTCTGATAAGCTAGCTGAAGCCATTGGTGATGATTCAGAAGCAGTGATATGTGCCACAGGCTTTCGGCCGGGGTGGGATTTGCTTGCTCCGTGGAAGGTTGACAATTTTGGTACTGTAAACCTTGTTGAAGCCTGCAGGAAACGTAATGTCAAGAGATTCATTCTTATCAGTTCCATTTTAGTTAATGGAGCATCTATGGGACAGCTACTCAATCCGGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAATTATATCAGGAAATCTGGCATAAACTACACAATTATAAGACCGGGCGGGTTGAGAAATGATCCTCCAACTGGAAATGTTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCAAGTTGCAGAAGTAGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTATAAAGTCGTGGAAATTGTGTCTCGCCCAGATGCTGCTAAGCGTTCATACCATGACCTTTTTGGTTCCATAAGGCAGCGATGA 876 0.4475 MPMASTLTIVRNPIFLTHHYQLNKHFKTPSSLRLLSFAKMEGSEISEEVGEDSRAKRKIFVAGATGSTGKRIVEQLLAKGFSVKAGVRDLDKAKSTLSSANPSLQIVKADVTEGSDKLAEAIGDDSEAVICATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVKRFILISSILVNGASMGQLLNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVEALAYPEASYKVVEIVSRPDAAKRSYHDLFGSIRQR* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1028 291 Pfam NAD(P)H-binding 63 260 IPR016040 -
Vra7g1028 291 Gene3D - 43 281 - -
Vra7g1028 291 PANTHER FLAVIN REDUCTASE-RELATED 40 291 - -
Vra7g1028 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 272 IPR036291 -
Vra7g1028 291 CDD SDR_a5 58 273 - -
Vra7g1028 291 PANTHER - 40 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1028 Vra-Chr7 24910611 24912899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1028 56 188 Monolignol Biosynthesis Gene Families AT2G33590 34.507 2.17e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1028 - - gmx:100812074 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1028 7 24910611 24912899 Vra7g1028 7 24910611 24912899 ECH