Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1011 ATGGGTTTAGCGGCACCTTATTCCGTTGGAACAAGCCTCCCGTCCCTCCAACGCCTTCCTTCCCTGAAACCCCAAATCTGTAACAATTATTCATCACCTGTTAGTTCCCACCGTCATGTGAAATGTGCTCTCCAACTTCAACCACAAACACCACCACCACCAACAACTGTAACAGTGGCACCGGACGAGAGCCTCGTGAAGAGAAGAACTTTAATAGGCCTTTTTGCATTTGATGCTGTCCTTGCTTATTCTTCCTTAAATTCATCATCAGCAGCTGAAACTCCATGTGAATTTCAAGTGGCACCTTCTGGTCTTGCCTTCTGTGATAAAGTTGTGGGAGCAGGTTCTCAGGCAGTCAAGGGACAACTTATTAAGGCGCATTATGTGGGGAGATTGGAGAATGGGAAAGTTTTTGACAGCAGCTATAATCGTGGCAAGCCACTAACGTTTCGCGTTGGTGTTGGAGAGGTGATTAAAGGTTGGGATGAAGGCATTATTGGAGGTGATGGAGTTCCTCCCATGCTTGCAGGAGGGAAACGTACCCTGAAGATTCCTCCAGAACTTGGATATGGCTCAAGAGGAGCTGGTTGTCGAGGAGGTTCATGTATCATTCCTCCTGATTCAGTGCTATTGTTCGATGTGGAGTTCGTTAGCCAAGCATGA 663 0.4706 MGLAAPYSVGTSLPSLQRLPSLKPQICNNYSSPVSSHRHVKCALQLQPQTPPPPTTVTVAPDESLVKRRTLIGLFAFDAVLAYSSLNSSSAAETPCEFQVAPSGLAFCDKVVGAGSQAVKGQLIKAHYVGRLENGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGIIGGDGVPPMLAGGKRTLKIPPELGYGSRGAGCRGGSCIIPPDSVLLFDVEFVSQA* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1011 220 Gene3D - 92 219 IPR046357 GO:0003755
Vra7g1011 220 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 117 216 IPR001179 GO:0003755
Vra7g1011 220 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 121 220 IPR001179 GO:0003755
Vra7g1011 220 SUPERFAMILY FKBP-like 97 218 - -
Vra7g1011 220 PANTHER - 64 219 IPR044609 GO:0000413|GO:0003755|GO:0061077
Vra7g1011 220 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 64 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1011 Vra-Chr7 24408936 24411742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1011 121 218 Calmodulin-binding Proteins AT5G48570 42.857 8.34e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1011 K01802 - gmx:100778390 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1011 7 24408936 24411742 Vra7g1011 7 24408936 24411742 ECH