Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0997 ATGTCTTTGGTTGCTCCGAGTTCCCTTTTGAAGGTGGAGGAAATACAAGGAAGAGGGAGGGGAATGGTTGCATCTCAGCCTCTTAAAGCTGGTCAAATTGTCCTGAAAGACTCCCCCATTCTGCTGTATTCAGCTTTGCCCTTGATCAGACAGTCTTTGTCAGCGTCATCCTCTGCCTCAACTTCATGTTTCTGTGATCACTGCTTCAGAACCTTGCCTCCATTTTTACAGGGAGATTCTTCGTCATCCACAGTTTTGTGCCCCAATTGTCGCTACCATCGTTTCTGCAGCTCAAGTTGTCTTTCAAAGGCATTGAACTCCTCCCATTCTTCTTGGGTATGTCAAGCGTTATCTAGTCTCAGATCCAATTCTCTACTGATTGAACAGCCGCTTGAACGCCAAGTCCAGGCTAATTTTCTCATAGCTGCCTACAATCTTGCCAATATCTCCCCTTCAGACTTCCAAATTTTGCTTTCTCTCCAGGGTTCTCCTGATGATACCACCAATGCTGCAGCCAAGTTCCTACACCCCTTTATTTCATCTCTCTGCTCACTTTCTCTCATTAGTCCCCAGAATGGGTTTTCTTTAGAACTCACCTCTGCACTTCTCGTCAAGGACAAGCTCAATGCCTTTGGAATAATGCAGCCCTTCTCTGCAGATGACGACCAGAGGTCTGTCAGAGCCTATGGTATATACCCCTATGCTTCCTTTTTTAACCATGACTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGACATCAATCCACATGAAGACAGCCATAATACTGACTTTATTATTAGGATGGTTCATGATGTTCCCCAAGGTAGGGAGATTTGTTTGAGTTATTTCCCTGTCAATGAAAACTATTCTAGTAGGCAAAAGAGATTGATTGAAGACTATGGCTTCTCCTGTAATTGTGATCGATGTAATGTGGAGTCAAATTGGTCAGATAATGATAGTGTTGAAGATAATGCTGAGGATGAGGAGGAGGTTATGGATGAGGACCAATATGAAATTATGGAAGCGTCAGACACTGATAAACATGCTCTTGAAGATAATAATGATTTCCCACATGCATATTTCTTTGTAAAATACATGTGTGATAGAACGAATTGCTGGGGAACATTAGCTCCATTACCTCCGGAGGGTGATACTCCATCTAATGTCATGGAATGCAATGTCTGTGGAAAATTGAAGAGTGACGATACCTTTGATGTTGATGAAGGTCTTATGGAGGACTAA 1245 0.4289 MSLVAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLKDSPILLYSALPLIRQSLSASSSASTSCFCDHCFRTLPPFLQGDSSSSTVLCPNCRYHRFCSSSCLSKALNSSHSSWVCQALSSLRSNSLLIEQPLERQVQANFLIAAYNLANISPSDFQILLSLQGSPDDTTNAAAKFLHPFISSLCSLSLISPQNGFSLELTSALLVKDKLNAFGIMQPFSADDDQRSVRAYGIYPYASFFNHDCLPNACRFDYVDINPHEDSHNTDFIIRMVHDVPQGREICLSYFPVNENYSSRQKRLIEDYGFSCNCDRCNVESNWSDNDSVEDNAEDEEEVMDEDQYEIMEASDTDKHALEDNNDFPHAYFFVKYMCDRTNCWGTLAPLPPEGDTPSNVMECNVCGKLKSDDTFDVDEGLMED* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0997 414 SUPERFAMILY SET domain 10 311 IPR046341 -
Vra7g0997 414 Pfam SET domain 19 283 IPR001214 GO:0005515
Vra7g0997 414 ProSiteProfiles SET domain profile. 8 284 IPR001214 GO:0005515
Vra7g0997 414 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 3 408 IPR044238 -
Vra7g0997 414 Gene3D - 64 123 - -
Vra7g0997 414 CDD SET_SMYD 208 310 - -
Vra7g0997 414 Gene3D SET domain 21 310 IPR046341 -
Vra7g0997 414 SMART set_7 8 290 IPR001214 GO:0005515
Vra7g0997 414 Gene3D - 128 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0997 Vra-Chr7 24142510 24145743 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vra7g0997 SET 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0997 - - gmx:100783406 732.25