Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0992 ATGTCATGGATTAACATGTTAAATATGATGTTAAATATCAGACTCTATGTGAGGGGTACAATCCTTGGATACAAAAGGTCCAAGTCAAACCAGTATCCCAACACATCCTTGATCCAAATTGAGGGAGTGAACACCACAGAAGAAGTAGGATGGTATGCTGGCAAGAGATTGACCTATATTTACAAGGCTAAGGTGAAGAAGAATGGAAGCCACTACCGTTGCATTTGGGGTAAGGTTACAAGGCCTCATGGTAACAGTGGTGTTGTTCGTGCTAAACATTGCTTGTATAATATAAAGAGTTACATACCAATATTTATAATCACATGA 327 0.3853 MSWINMLNMMLNIRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTTEEVGWYAGKRLTYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKHCLYNIKSYIPIFIIT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0992 108 Gene3D translation elongation factor selb, chain A, domain 4 10 99 IPR038661 -
Vra7g0992 108 Pfam Ribosomal protein L35Ae 15 92 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vra7g0992 108 PANTHER 60S RIBOSOMAL PROTEIN L35A 13 93 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vra7g0992 108 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 13 93 - -
Vra7g0992 108 SUPERFAMILY Translation proteins 15 92 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0992 Vra-Chr7 24071418 24072623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0992 13 92 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 90.000 6.81e-51 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0992 K02917 - qsu:111983054 162.54