Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0918 ATGACTCTTCTCTCCAACAGCATGGACAATGGTTGTTTCTCTTCGCCACGCCATGAGGCTTTTCCAGCTGGTCTGCGAGTTCTTGTTGTTGATGATGATCCAACATGGTTGAGGATCCTTGAAAAGATGCTCAAGAAGTGTTTGTATGAAGTGACTACATGTTGTTTAGCAACAGAGGCTCTGAAAAAACTTCGAGAAAGGAAAGATGCATATGACATAGTGATCAGCGATGTGAACATGCCTGACATGGATGGCTTCAAACTTCTTGAGCAAGTTGGACTTGAGATGGATCTTCCAGTCATCATGATGTCTGTTGATGGAGAAACCAGTAGAGTAATGAAAGGTGTCCAACATGGTGCATGTGATTATCTCCTCAAGCCTATAAGGATGAAAGAACTGAGAAACATATGGCAGCACGTCTTTAGAAAAAGGATGCATGAAGCGAGAGATTTTGAAAGCCATGAGGGTTTTGAGGCCCTTCACTTGCTGATGAATGGATCAGAGCAGTCCGACGATGGTAACATCTTTGCCGTAGAAGAAATTACCTCGATAAAGAAAAGAAAAGATGCAGATAGCAAGCACGATGACAAAGAATTTGGAGATCATTCTCCCACAAAGAAAGCTAGGGTAGTTTGGTCTGTGGATCTTCACCAGAAATTTGTCAAAGCCGTGAATCAAATTGGATTTGATAAAGTTGGTCCCAAGAAAATTCTTGATTTGATGAGTGTTCCCTGGTTAACCAGAGAAAATGTTGCTAGTCACTTGCAGAAATACAGGCTCTACTTGAGTAGGTTGCAAAAGGAAAATGATCAGAAATCTTCGTCAAGTGGAATAAAGCATTCGGATTCACCTTCAAAAGATCCAGGAAGTTTTAGTTTTCTAAACACTGCAAGCAACAAGCAACAAAGTGATGTTGTCATTGACAGCTTCAGTCCTTCAGATGGAAGTTTACTACAGATGGATGCTCCAAGTCATGAAGGCGACCTCAAGAGAATCTTGTCAGAGCCTACAACCGAAAAAAGAAGAGCTTCACCAAAAAGTTCACAGATGAGCCTCAATCAACCTTTTTCATCTGTAGAGTCATCAGAAGCAAGCCATGCAATATTTGATTGCACCATACAAACACAGTACTCTTGGGGTGAGTTTCCAAAAGGACCACTCAAAGAAGAACAGAAGACAACTGTTCAATTAGAGGATAGCTTCAGCCAGTTGCCATTACACGGTACACGGCATCACATTCAGGTTGATCAATCACAATCGATTGCTTCGATTAATTCTAATCCTTCTATAACAGAAGAAGAGGTTGCTCCCAGCTTAGACACCAAGCCTTTATATGCTGGTTACAAGAGTGATTATGTGAGCCCTGTGAGTTCAATGGGAACTGCAGTTGACACCTTTCCTAACCAGTCCAAAAGCCTCATCCTGAATGATCAATCTCCAGAGCCCATTTTCACCTCAAATTTGGGATTAAAAACTGATGGATTTGATGTTGATTGCATTTCTGATCTGGATTTTTACCAAAGGAGTCTATTATTGTGTGGTGATGCAGCTTCTGCACCTTTGGAAGAGGACCTGAATTTCTTTTTGCTGCAAACTGAATGGTACAACATGAATTTTGGGCAGCAGAATATAGATATATCAGAATGTTATGATCCAAGGCTTGTTGCTGAAGCCCCTGGCTACTTTTATGATTCTGCAGATTATTCATCCGTAGACCAAAGTCTATTCATAGCATGA 1737 0.4111 MTLLSNSMDNGCFSSPRHEAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDVNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRMHEARDFESHEGFEALHLLMNGSEQSDDGNIFAVEEITSIKKRKDADSKHDDKEFGDHSPTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMSVPWLTRENVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKDPGSFSFLNTASNKQQSDVVIDSFSPSDGSLLQMDAPSHEGDLKRILSEPTTEKRRASPKSSQMSLNQPFSSVESSEASHAIFDCTIQTQYSWGEFPKGPLKEEQKTTVQLEDSFSQLPLHGTRHHIQVDQSQSIASINSNPSITEEEVAPSLDTKPLYAGYKSDYVSPVSSMGTAVDTFPNQSKSLILNDQSPEPIFTSNLGLKTDGFDVDCISDLDFYQRSLLLCGDAASAPLEEDLNFFLLQTEWYNMNFGQQNIDISECYDPRLVAEAPGYFYDSADYSSVDQSLFIA* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0918 578 CDD REC_typeB_ARR-like 27 141 - -
Vra7g0918 578 MobiDBLite consensus disorder prediction 269 295 - -
Vra7g0918 578 Pfam Myb-like DNA-binding domain 209 259 IPR001005 -
Vra7g0918 578 MobiDBLite consensus disorder prediction 324 342 - -
Vra7g0918 578 SMART REC_2 25 137 IPR001789 GO:0000160
Vra7g0918 578 MobiDBLite consensus disorder prediction 343 357 - -
Vra7g0918 578 SUPERFAMILY CheY-like 24 153 IPR011006 -
Vra7g0918 578 Gene3D - 25 198 - -
Vra7g0918 578 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 553 IPR045279 GO:0009736
Vra7g0918 578 MobiDBLite consensus disorder prediction 316 357 - -
Vra7g0918 578 ProSiteProfiles Response regulatory domain profile. 26 141 IPR001789 GO:0000160
Vra7g0918 578 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 553 - -
Vra7g0918 578 Pfam Response regulator receiver domain 27 136 IPR001789 GO:0000160
Vra7g0918 578 Gene3D - 204 266 - -
Vra7g0918 578 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 207 260 IPR006447 GO:0003677
Vra7g0918 578 SUPERFAMILY Homeodomain-like 205 264 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0918 Vra-Chr7 20462824 20467554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0918 19 273 Response Regulator Gene Family AT2G25180 53.184 2.94e-81 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Vra7g0918 Response_reg 1.3e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0918 - K14491 gmx:100778324 999.193