Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0917 ATGGGTTTACCTTCTCTCCTTCTTGTTTTAATTCCTCTGCTGACATCATTTGCTGTTTGCCAACCTGAAGAGTTTGTGAGCATTGATTGTGGTGGATCAAACAATTACACTGATAACAGCACGGGTTTGGCATGGATCTCAGACTCTGGGATCATGGAACATGGCATTTCAGTGGAAGTGCAAAGTCCAAATGCAAGCATGGTGCAATATCAAAAGAGGAGAGAGTTTCCCATAGACACCAAGAAGTACTGTTACACGCTGAGCACAGAGGAGAGAAGAAGGTACTTGGTGAGAGCAACTTTTCATTATGGAAGCTTGGAGAGTGGGGACACTTACCCTCAGTTTCAGCTCTACTTGGATGCAACCAAGTGGGCTACTGTGTCAGTATATGATGCCTCAAGAATATATGTTAAGGAAATGATAATCAGGGCACCCTCAAATTCTATTGATGTATGTGTGTGCTGTGCTACTACTGGTTCTCCCTTCATTTCCACTCTTGAGTTGCGACCCTTCAATCTTTCAATGTATGCCACGGATTTTGAAGACAATTTCTTCTTAGAAGTTGCTGCAAGAATAAATTTTGGCGCACCAACTGAAGATGCTGTCAGGTACCCGGATGATCCATATGATAGAATTTGGGATTCTGATCTAATTAGAAGGCAAAATTACCTTGTTGGAGTAGCCCCAGGCACAGAAAGGATTGGCACTACAAAGAACATAGATGTAGAGACAAGAGAATACCCACCTGTTAAAGTAATGCAAACTGCAGTAGTTGGCAGAAAAGGAGTGCTCAGCTACAGATTGAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCATATTTTGCAGAGATTGAAGATTTGGACAAGAATGAGAGTCGAAAATTCAAATTAAAGCAACCTTATATAGCTGACTATAGCAATGCAGTGGTCAACATTGCTGAGAATGCCAATGGGAGCTACACTTTATATGAACCGAGTTATATGAATGTTACTCTAGAATTTGTTTTATCATTCTCCTTTGTTATGACCCCAGATTCTACCCGAGGACCTCTTCTGAATGCACTGGAAATAAGCAAATATGTAGAGATTGCTTCAAAGACAGACAAACAAGACTCCACCGTCGTAAATGCATTTCGGTTATTGTCTGATGAAAGTTCCCAGACAAATGAAGGTGATCCTTGTGTTCCAACTCCTTGGGAATGGGTGAATTGTAGTACCACCACACCGCCAAGAATAACAAAAATAATTCTTTCAAGAAGGAATGTGAAAGGTGAAATCCCACCTGAGCTTGGCAACATGGAAGCACTGACAGAGCTGTGGTTAGATGGAAACCTGCTTACTGGACCATTACCTGACATGAGCAAACTGATAAGTCTAAAGATTGTGCACTTAGAGAACAACAAGTTGTCTGGTCGATTATCGTCTTACCTTGGTAGTTTGCCAAGCTTACAAGCACTGTTCATACAGAATAACTCATTTAGTGGGGAAATACCGGCTGGATTAGTTTCTGAAAAAATTGTTTTCAGCTTTGAAGGTAATCCTGGACTATACAGAGGGAACAAGAAGCATTTTAAGATGGTGGTGGGAATTTCAATTGGAGTACTAGTGATCCTGTTAATATTATTCTTGGTAAGTTTGGTGCTATTGCTCAATACGCGGAGAAAGGCATCTCAAAAGAAACGTGAGGAAAAAGGTATTTCTGGACGCACTAACAGTAGACCTTTAACTGGATACTCATTTCTTCGGGGTGGATGTTTGATGGATGAAAACACTACTTGCCATATTACACTCTCAGAGTTGAAAGAAGCTACTGACAATTTTTCAGAGAAAATTGGCAAAGGAAGCTTTGGATCTGTTTACTATGGGAAAATGAGAGATGGAAAAGAAATTGCAGTTAAGAGCATGAGTGAATCGTCCTGCCATGGGAACCAGCAATTTGTTAACGAGGTGGCCCTCTTATCGAGAATTCATCACAGAAATTTGGTTCCCTTGATTGGATATTGTGAAGAAGAATGTCAACATATTCTGGTCTACGAGTATATGCACAATGGCACTTTACGGGATCACATTCATGAGAGTTCCAAGAAGAAGAACTTGGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGCAATCCTAGCATCATTCACCGTGATATAAAGACAGGTAACATTCTTTTAGATATAAATATGAGAGCAAAAGTATCAGACTTTGGACTCTCTAGGCTAGCTGAAGAAGATTTAACCCATGTATCAAGCATTGCAAGAGGAACTGTCGGCTACTTGGATCCTGAGTACTATGCAAGCCAGCAATTGACAGAAAAGAGTGACGTATACAGTTTTGGAGTTGTTCTGCTGGAATTGATATCTGGAAAGAAACCTGTGTCATCTGAAGATTACGGTGCTGAAATGAACATTGTTCAATGGGCTAGATCATTAACTCGTAAAGGAGATGCCATGAGCATCATTGATCCTTCTTTGAATGGGAATGCTAAAACTGAGTCCATTTGGAGGATGGTTGAAATAGCCATGCAATGTGTGGAACACCATGGTGCCTCAAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATAGAACAAGGAACAGAAAATAAGCTAAAATCACCAGCATCATCATCATCATTTTCAGGTAGCAGCACTTCAAAGCCACACTCTTCACGCAAGACTTTACTCACAAACTTTCTTGAAATTCAGAGCCCTGACGTTTCAAATGGTTGCCTCCCATCAGCAAGATAA 2811 0.4088 MGLPSLLLVLIPLLTSFAVCQPEEFVSIDCGGSNNYTDNSTGLAWISDSGIMEHGISVEVQSPNASMVQYQKRREFPIDTKKYCYTLSTEERRRYLVRATFHYGSLESGDTYPQFQLYLDATKWATVSVYDASRIYVKEMIIRAPSNSIDVCVCCATTGSPFISTLELRPFNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERIGTTKNIDVETREYPPVKVMQTAVVGRKGVLSYRLNLEDFPANARAYAYFAEIEDLDKNESRKFKLKQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVMTPDSTRGPLLNALEISKYVEIASKTDKQDSTVVNAFRLLSDESSQTNEGDPCVPTPWEWVNCSTTTPPRITKIILSRRNVKGEIPPELGNMEALTELWLDGNLLTGPLPDMSKLISLKIVHLENNKLSGRLSSYLGSLPSLQALFIQNNSFSGEIPAGLVSEKIVFSFEGNPGLYRGNKKHFKMVVGISIGVLVILLILFLVSLVLLLNTRRKASQKKREEKGISGRTNSRPLTGYSFLRGGCLMDENTTCHITLSELKEATDNFSEKIGKGSFGSVYYGKMRDGKEIAVKSMSESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHESSKKKNLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDIKTGNILLDINMRAKVSDFGLSRLAEEDLTHVSSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGAEMNIVQWARSLTRKGDAMSIIDPSLNGNAKTESIWRMVEIAMQCVEHHGASRPRMQEIILAIQDAIKIEQGTENKLKSPASSSSFSGSSTSKPHSSRKTLLTNFLEIQSPDVSNGCLPSAR* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0917 936 MobiDBLite consensus disorder prediction 889 912 - -
Vra7g0917 936 Gene3D Ribonuclease Inhibitor 369 515 IPR032675 -
Vra7g0917 936 Gene3D Phosphorylase Kinase; domain 1 588 682 - -
Vra7g0917 936 SUPERFAMILY L domain-like 397 504 - -
Vra7g0917 936 SMART serkin_6 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0917 936 SUPERFAMILY Protein kinase-like (PK-like) 594 874 IPR011009 -
Vra7g0917 936 Gene3D Transferase(Phosphotransferase) domain 1 683 899 - -
Vra7g0917 936 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Vra7g0917 936 PANTHER OS07G0107800 PROTEIN-RELATED 12 911 - -
Vra7g0917 936 Pfam Malectin-like domain 28 361 IPR024788 -
Vra7g0917 936 ProSiteProfiles Protein kinase domain profile. 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0917 936 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
Vra7g0917 936 MobiDBLite consensus disorder prediction 888 912 - -
Vra7g0917 936 PANTHER - 12 911 - -
Vra7g0917 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Vra7g0917 936 CDD STKc_IRAK 613 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0917 Vra-Chr7 20415622 20420509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0917 1 936 Receptor kinase-like Gene Family AT1G67720 66.702 0.0 1261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vra7g0917 Malectin_like 8.1e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0917 - - gmx:100790944 1659.81