Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0891 ATGTCTGGATTCCAGGGTCGCGAGTTATGCAGCTTCATTTCAAAGAATCCCTCCATTTTGACTCATAGCTTGAAGAAAACATTGGTCCCCTCAGTTGAAGCTATTAGGAAAATTGTGTGCGACCAGAAAGATTTTATTCTTGTGTTGCACAGATGTGGCTGGATACTCCCAAAGTACAAAAGGTTTATGGATAATGCCGTCTTCTTGGAGAGGTGTGGCATTCTTGGGACTCATCTTGCATTGCTACTCAAACTTCACCCAAGGCTTATCATTGCACAGCAGTCCACTATTGAAAACCGTGTTTCTCGAGCTGTAGACGTGGGTTTCCGTGAAAATTCAAGAATGCTTGTCCATGCAATTCTTACATTAAGTTGTTTGAGTGTTAAAACATTTGAGAGAAAGCTGAAACTAATTAATAGTTTCGGGTTTTCCAACGATGAGGGCCTACAAATGTTCAAGAGAACCCCGACTTTGTTCAGAACATCCGAGATGAAGTTGAAAGTTGGAATGAAATTCTTCTTGCACACAGTTATGCTGCCCAAGTCAGTCCTTATTCACCAGCCTCGGATTTTAATGTACAGCATGGAGGATCGCGTGCTTCCTCGATATAAAGTCTTCCGGTTGTCGAAATCAAAAAATCTCTGCAAGAAAGTCCCCAGTTATATTCATGTGTTGTGCTTGTCTGAGGAGATGTTTTTGGACAAGTATATATCACAGTTCAGGGAAAATGCAGAGGAGGAGTTATTAGTAGCATACAAGGGTCATTATCTGGAGGCATAA 780 0.4141 MSGFQGRELCSFISKNPSILTHSLKKTLVPSVEAIRKIVCDQKDFILVLHRCGWILPKYKRFMDNAVFLERCGILGTHLALLLKLHPRLIIAQQSTIENRVSRAVDVGFRENSRMLVHAILTLSCLSVKTFERKLKLINSFGFSNDEGLQMFKRTPTLFRTSEMKLKVGMKFFLHTVMLPKSVLIHQPRILMYSMEDRVLPRYKVFRLSKSKNLCKKVPSYIHVLCLSEEMFLDKYISQFRENAEEELLVAYKGHYLEA* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0891 259 SMART mt_12 181 213 IPR003690 GO:0003690|GO:0006355
Vra7g0891 259 SMART mt_12 80 110 IPR003690 GO:0003690|GO:0006355
Vra7g0891 259 SMART mt_12 10 41 IPR003690 GO:0003690|GO:0006355
Vra7g0891 259 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Vra7g0891 259 SMART mt_12 114 144 IPR003690 GO:0003690|GO:0006355
Vra7g0891 259 Pfam mTERF 127 233 IPR003690 GO:0003690|GO:0006355
Vra7g0891 259 Pfam mTERF 3 136 IPR003690 GO:0003690|GO:0006355
Vra7g0891 259 PANTHER EMB|CAB62602.1 3 255 - -
Vra7g0891 259 PANTHER CGI-12 PROTEIN-RELATED 3 255 IPR003690 GO:0003690|GO:0006355
Vra7g0891 259 Gene3D Transcription termination factor 3, mitochondrial 2 243 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0891 Vra-Chr7 19609422 19613651 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vra7g0891 mTERF 9.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0891 K15032 - vvi:100268158 254.603