Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0881 ATGGGTTCAGGTGATTGGTTTAAGACAATAATTAACTCAAAAAAATCAAAAGAAGGAAGGTCAAAGAAAGTAAAGACTAAGATTTATAAAGGGAAAAAGTCCAGCGGTTTAGCAAATGGCATTAAAAGCAAAAATCTAGAGTCAGCTGGAGTTTCAATTGAAACTATTGCTGCAACAAGGATTCAAACAGCATTCCGAGCTTATAAGGCTAGAAAACATTTACGTCGCTTGAGAGGATTCACAAAACTGAGAACCCTGACTCAAGGTTTCTCTGTTCAAAAACAAGCTAGTACAACTATAACTCATCTTCATTCATGGACCAAGATACAGGCTGAGATTAGAGCTCGTCGAATATGTATGGTGACAGAAGACAGGCTCAGACGGAAGAAACTACATTCTCAACTAAAACTAGAGGCCAAGATTCATGACCTTGAGGTGGAATGGAGTGGTGGTTCTGAAACCATGGAGAAAATCCTTGCAAGGTTACACTTACGAGAAGAAGCAGCAGTTAAACGGGAAAGAAGTATGGCATATGCCTTCTCTCATCAGTGGAGGGCCAACTCTAGCCAAGGTCTAGGCAATTACGAACTTGGCAAAGCTAGTTGGAGTTGGAGCTGGAAAGACCGTTGGATTGCTGCACGCCCTTGGGAAAGCCGTGTCCCCAGTGTTACCATTAGCCCCAGGAAAGATCAAAATAAGATGTCAAGTAAAGTTAAAAAGGATAAGAAATCATCAACATCAAAACAACCAGTTTCAGTTAAAACTCCTTCAGCTAATGATAAAGGAACTAAACCCTTAGGTAATCCCAAAGGAACTGCTAAAGCTAGAAGAAGATTGTCTTACCCTGCTACAGAGAAAAAAACAGTGCAAGAAGGAAAGCAATGA 885 0.4045 MGSGDWFKTIINSKKSKEGRSKKVKTKIYKGKKSSGLANGIKSKNLESAGVSIETIAATRIQTAFRAYKARKHLRRLRGFTKLRTLTQGFSVQKQASTTITHLHSWTKIQAEIRARRICMVTEDRLRRKKLHSQLKLEAKIHDLEVEWSGGSETMEKILARLHLREEAAVKRERSMAYAFSHQWRANSSQGLGNYELGKASWSWSWKDRWIAARPWESRVPSVTISPRKDQNKMSSKVKKDKKSSTSKQPVSVKTPSANDKGTKPLGNPKGTAKARRRLSYPATEKKTVQEGKQ* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0881 294 PANTHER IQ-DOMAIN 9 1 287 - -
Vra7g0881 294 SMART iq_5 53 75 IPR000048 GO:0005515
Vra7g0881 294 MobiDBLite consensus disorder prediction 279 294 - -
Vra7g0881 294 Pfam IQ calmodulin-binding motif 57 75 IPR000048 GO:0005515
Vra7g0881 294 MobiDBLite consensus disorder prediction 248 262 - -
Vra7g0881 294 ProSiteProfiles IQ motif profile. 54 82 IPR000048 GO:0005515
Vra7g0881 294 MobiDBLite consensus disorder prediction 223 294 - -
Vra7g0881 294 MobiDBLite consensus disorder prediction 232 247 - -
Vra7g0881 294 PANTHER IQ-DOMAIN 5-RELATED 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0881 Vra-Chr7 19126954 19131667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0881 1 282 IQD Protein Family AT2G33990 49.117 1.34e-81 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0881 - - gmx:100800675 463.766