Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0872 ATGAAGAAGGTTCCCAAGAACAGCTGCAAGTCTGCATCGCACAGGCTCTTTAAGGACAAGGCGAAGAACCGTGTGGATGACCTACAGGTGATGTTCCTCGATCTGCAGTTTGCTAGAAAGGAGAGTCGCACGGTTGATGCTGCAGTGCTTGAGGAGCAAGTTCATCAAATGCTTCGCGAGTGGAAGGCTGAGCTCAATGAGCCCTCGCCTGCATCTTCGTTGCAGCAAGGTGGCAGTCTTGGGTCATTCTCCACCGATATCTGTCGGCTATTGCAGCTTTGTGATGAGGAAGATGATGCCTCTAGTCCGTTAGCTGCTCCTAAGCCTGAACCAAATGATCAGACACTACAGGCTGAGGGTGAGGTTGTGTTCCAAGAGGGCCAACAGCAATATGATTTTCCGTTGATTGATGAGTGCAAAAACTCCACCTCAAGTGTTCAAAACGCTGCAGCTAACAACCCAGATGGACATGCTTTAGAATATCATCAGTTTGATTTGCATCAGGACTATGATAATGGCTTTTACACTGGTTTTAATGGTACAGGTTATTGTGAGGAGGATGCTATTCCTCATATATCTAGCTACCTACCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTACTGCAGTAGCTTTCATGCTGCCTTAGCTTTGAATGAAGGGCCTCCAGGCATGGCCCCAGTTCTACGACCTGGGGGAATTGGTTTGAAGGATAATTTACTTTTTTCTGCCCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAGTGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGAGCTCTTTGATCTGTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTCTTCTTTGATAAGCCACGTAGAGCATTTGAGAGTGGAAATAGAAAACAAAGGTCATTGCCAGATTATAGTGGACGTGGTTGGCATGAATCTAGAAAGCAAGTCATGAATGAGTTTGGAGGGCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAGTGGCACCTTTATGAATACGAGATTAGCAAGTGTGATGCATGTGCCTTGTACCGATTGGAACTGAAGCTTGTTGATGGTAAGAAGAACTCCAAGACAAAGTTAGCTAGTGATTCAGTCGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCCGAGTTTCCACATGACAACAAAAGGGCTGCCAAAGGCAGAACCAAAGTTAATTCAAAAGTTGGCATAGGTGGTGTCTATTCAGCTTCACGCAGAGTGACTACACTAAATGGAGCGTATGAGTATGGGTTGGCTGCACCATATGACTATCTTGTTGAGAACATGGGCGACTACTATGGGACATGA 1434 0.4665 MKKVPKNSCKSASHRLFKDKAKNRVDDLQVMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCDEEDDASSPLAAPKPEPNDQTLQAEGEVVFQEGQQQYDFPLIDECKNSTSSVQNAAANNPDGHALEYHQFDLHQDYDNGFYTGFNGTGYCEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKTKLASDSVADLQKQMGRLSAEFPHDNKRAAKGRTKVNSKVGIGGVYSASRRVTTLNGAYEYGLAAPYDYLVENMGDYYGT* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0872 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 IPR039277 GO:0006355|GO:0048578
Vra7g0872 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0872 Vra-Chr7 18851345 18859100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0872 3 475 VOZ-9 Transcription Factor Family AT1G28520 71.283 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vra7g0872 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0872 - - pvu:PHAVU_003G073700g 944.495