Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0859 ATGGCTATTACACCAGGACTGGAGCATACAAGGAAGGCTATTGGATGGGCAGCAAGAGACACATCTGGGGTTCTTTCCCCCTTCAATTTCACGAGAAGGGATACAGGAGAGAAAGATGTAGCAATCAAAGTTTTATACTCTGGTATATGCCACACCGACCTCCATAATGCAAAGAGTGAATGGGGTCCATCCTTTTATCCACTCGTACCCGGGCACGAGATTGCAGGTGAAGTGATAGAGGTAGGAAGCAAGGTGGAAAAGTTGAAGGTGGGTGACAAGGTGGGTGTGGGGTGCATGGTTCTATCCTGCAGGTCATGTAAAAGCTGTGATGAGAATCTCGAGAACTACTGTCCAAAAATGATTCTGACATACGGAGCGAAGTATGTTGATGGAAGCATCACACAAGGAGGCTACTCTGATCTGGTGGTTGTAGATGAACACTTTGTCATCAGCATTCCTGACGGTCTACCTCTTGAGGCTGCTGCACCTCTCTTATGTGCTGGGATCACAGTGTATAGCCCTCTCATATATTTTGGACTTGACAAGCCAGACACCCATGTGGGTGTGGTTGGTCTTGGTGGGGTTGGTCACATGGCTGTCAAGTTTGCCAAAGCTTTTGGAGCTAAGGTCACTGTAATCAGCACATCTCCAAATAAAAGGAAAGAAGCCATTGAGCATCTTGGAGCTGACTCATTTGTGGTCAGTCGTGAGGAAGATCAGATGCAGGCTATAAAGGGTACCTTGGATGGTATAATAGACACAGTTTCTGCAGTCCATCCTCTGCTCCCTCTGTTGGATTTGTTGAAGAGTCATGCGAAACTTGTGATAGTTGGTGTTCCTGATAAGCCTTTGGAGCTACCCATCTTTCCTTTACTAGCCAGAAAGGGTGTAACTGGCAGTAGCATTGGAGGAATAAAGGAGACACAAGAAATGATTGATTTTGCTGTCAAACACGATATAAAGCCTGATATTGAGATTATTCCTATTGATTATGTGAACAAAGCAATGGAGCGTCTCGTCAAAGCAGATGTAAAATATCGATTTGTTATTGACATTGGCAACACACTAAAATCAAGTTCTTGA 1083 0.4469 MAITPGLEHTRKAIGWAARDTSGVLSPFNFTRRDTGEKDVAIKVLYSGICHTDLHNAKSEWGPSFYPLVPGHEIAGEVIEVGSKVEKLKVGDKVGVGCMVLSCRSCKSCDENLENYCPKMILTYGAKYVDGSITQGGYSDLVVVDEHFVISIPDGLPLEAAAPLLCAGITVYSPLIYFGLDKPDTHVGVVGLGGVGHMAVKFAKAFGAKVTVISTSPNKRKEAIEHLGADSFVVSREEDQMQAIKGTLDGIIDTVSAVHPLLPLLDLLKSHAKLVIVGVPDKPLELPIFPLLARKGVTGSSIGGIKETQEMIDFAVKHDIKPDIEIIPIDYVNKAMERLVKADVKYRFVIDIGNTLKSSS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0859 360 PANTHER ALDEHYDE REDUCTASE 1 359 - -
Vra7g0859 360 Gene3D - 167 322 - -
Vra7g0859 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Vra7g0859 360 SUPERFAMILY GroES-like 20 184 IPR011032 -
Vra7g0859 360 CDD CAD1 15 351 - -
Vra7g0859 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Vra7g0859 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 359 - -
Vra7g0859 360 Gene3D - 16 352 - -
Vra7g0859 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Vra7g0859 360 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Vra7g0859 360 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0859 Vra-Chr7 18117285 18120076 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0859 11 357 Monolignol Biosynthesis Gene Families AT4G37990 69.540 2.14e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0859 - - gmx:100809071 533.102