Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0856 ATGGGAGATGTGGCTAAGGACCTTACAGCTGGAACTATTGGAGGGGCAGCACAGTTGATATGTGGACACCCCTTTGACACTATCAAGGTCAAGCTCCAAAGCCAGCCTGTACCACTCCCCGGTCAGCTTCCCAAGTATTCAGGTGCATTTGATGCTGTCAAGCAGACAATAGCATCAGAAGGGCCAAGGGGTTTATACAAAGGTATGGGTGTTCCTCTTGCTACAGTAGCAGCTTTCAATGCTGTCCTGTTTTCAGTGAGGGGACAGATGGAAACATTAGTGAGGTCCAATCCTGGTGTTCCCCTCACAGTGAATCAGCAAGTTGTTTGTGGAGCTGGAGCTGGAGTTGCTGTTTCCATTCTTGCATGCCCAACTGAATTGATCAAATGCAGGTTGCAAGCTCAAAGTGCGCTTGCCGGCTCTGAAACAGCTACTGTGGCTGTTAAGTATGGAGGGCCCATGGATGTGGCCAGGCATGTTCTCAGATCAGAAGGGGGAATAAGAGGTCTTTTCAAGGGCCTGGTTCCCACAATGGCTCGAGAGATACCAGGAAATGCTATAATGTTTGGTGTATACGAAGCATTGAAGCGAAAGTTTGCAGGAGGAACTGATACTTCTGGCCTAAGTAGAGGTTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCTTTCTGGTTCATTGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGATTACAGAAACCCAAAATTTTCTGGATCATTTGATGCATTCAGGAAGATTCAAGCTTCACAGGGCTTCAAAGGCTTGTATAAGGGTTTTGGTCCTGCTATGGCCCGAAGTATTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGCATGA 894 0.4698 MGDVAKDLTAGTIGGAAQLICGHPFDTIKVKLQSQPVPLPGQLPKYSGAFDAVKQTIASEGPRGLYKGMGVPLATVAAFNAVLFSVRGQMETLVRSNPGVPLTVNQQVVCGAGAGVAVSILACPTELIKCRLQAQSALAGSETATVAVKYGGPMDVARHVLRSEGGIRGLFKGLVPTMAREIPGNAIMFGVYEALKRKFAGGTDTSGLSRGSLIVAGGLAGASFWFIVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIQASQGFKGLYKGFGPAMARSIPANAACFLAYEMTRSALA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0856 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Vra7g0856 297 Pfam Mitochondrial carrier protein 103 200 IPR018108 -
Vra7g0856 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Vra7g0856 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Vra7g0856 297 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Vra7g0856 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 296 - -
Vra7g0856 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Vra7g0856 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Vra7g0856 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 296 - -
Vra7g0856 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0856 Vra-Chr7 18035964 18039656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0856 22 296 Antiporters AT1G79900 33.094 1.12e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0856 K15109 - gmx:100791908 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0856 7 18035964 18039656 Vra7g0856 7 18035964 18039656 ECH