Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0845 ATGATTGAAAATAACTGTAATCACCCACTACTCCCATTTCTCGTCCAACTCACTNAAAACCAACTTCNCCACTCTCTCGATCTACATCTATATATAAGAAACCCTTTTTTCCACATTTCCTACTACACCAAAGTGTGCTATTTCTACCACAAACTTCTGCATTCACTCTCCTCTTGCCTCATACTTTCAATGGCTTCTTCTTCTTCCACTTCCCTATTAGTGCTTCTCTTTGCNATTTTTTCCACTCTTACATGTTGCTCTGTGGCTTCCAATGAATTCCAAGTTGGTGACTCAAATGGGTGGGTTGTTCCTCCCCAAAATGACACCAACTTCTACAATGAATGGGCTTCCCACAACAGGTTCCACGCTGGTGACACCCTCTGGTTTAAGTACAAGAAGGATTCAGTGATGGAGGTGGATGAGGGGGATTACACACACTGCAATGCCACACACCCCAAACTCTTCTCTAACAGTGGCAACACCAAGTTGAAGCTNGGCCACCCAGGGACCTTCTACTTCATGAGCGGTGCTTCAGGGCACTGTGAGGTGGGACAGAAGATGATTGTGAGGGTCATGGTGGATGAGTCTCTTCCTCAACATGCCAAGTCTTCTGGTTACCATATTGCAATTTCTCCAACTGGGCTGTCTCAAGTGCTCTTCTTTCAGTTTCTTTTGGCATCTTTCTTAGGTAGTTTAAGTAATTAG 705 0.4411 MIENNCNHPLLPFLVQLTXNQLXHSLDLHLYIRNPFFHISYYTKVCYFYHKLLHSLSSCLILSMASSSSTSLLVLLFAIFSTLTCCSVASNEFQVGDSNGWVVPPQNDTNFYNEWASHNRFHAGDTLWFKYKKDSVMEVDEGDYTHCNATHPKLFSNSGNTKLKLGHPGTFYFMSGASGHCEVGQKMIVRVMVDESLPQHAKSSGYHIAISPTGLSQVLFFQFLLASFLGSLSN* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0845 234 PANTHER BLUE COPPER PROTEIN 71 195 IPR039391 GO:0009055
Vra7g0845 234 Pfam Plastocyanin-like domain 107 185 IPR003245 GO:0009055
Vra7g0845 234 ProSiteProfiles Phytocyanin domain profile. 91 193 IPR003245 GO:0009055
Vra7g0845 234 Gene3D - 89 196 IPR008972 -
Vra7g0845 234 PANTHER EARLY NODULIN-LIKE PROTEIN 21 71 195 - -
Vra7g0845 234 CDD OsENODL1_like 92 192 IPR041846 -
Vra7g0845 234 SUPERFAMILY Cupredoxins 91 192 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0845 Vra-Chr7 17285505 17286860 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0845 67 192 Phytocyanin Superfamily AT3G18590 52.756 1.79e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0845 - - vra:106766138 456.062