Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0835 ATGGTGGCGCTGCAGTTGAATCTGCGACTGATGGCAACTGCAGGTGGATCTGCGATTAGTTTTCGGGGGTGCATCGGCGGCGCACTTGGAAGTGCGGTATCAGTTTCATCAATGGAAGTTGGTGTAGTCCCAGAATCAACAATAAGTGACATATCAGTGTCCTATTCAAAGTCACCAATAGGGACAAGTGACCTATTTCCTCCCCTTCCCATGCCTTCACATCTTACACCAATTGACAGAGAGGCCAGAGTCCTAAGATATAGGGAGAAAAAGAAGACAAGAAAGTTTGAAAAGAAGATAAGGTATGCCTCAAGGAAGGCTTATGCAGAAACCAGACCACGCATCAAGGGTAGATTTGCAAAGAGAACTGATGTGGAAGCTGAAGTGGATCAAATGCTCTCCACAACACTATTCAATGAAGTTGGAGGAACCTTTTTTCCATCTTTCTAG 450 0.4511 MVALQLNLRLMATAGGSAISFRGCIGGALGSAVSVSSMEVGVVPESTISDISVSYSKSPIGTSDLFPPLPMPSHLTPIDREARVLRYREKKKTRKFEKKIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMLSTTLFNEVGGTFFPSF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0835 149 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 27 149 - -
Vra7g0835 149 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 27 149 IPR045281 GO:0009909
Vra7g0835 149 ProSiteProfiles CCT domain profile. 80 122 IPR010402 GO:0005515
Vra7g0835 149 Pfam CCT motif 80 122 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0835 Vra-Chr7 17140793 17143154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0835 1 149 C2C2-CO-like Transcription Factor Family AT5G15850 55.705 5.81e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra7g0835 CCT 3.6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0835 - - vra:106766133 281.567