Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0814 ATGGAGAAGAAGATGGAAGCTACATTCCCACCCGTCACAGATCTAAGGAGCGGTTTCAATCCAGCTTCCAGAACCTTCCACAGCCTCAAATCACCACTTCTTCTCCCTCCTCCCAACGCTGCCATCTCCGCCGCTTCCTACGTCCTCTTTCTCCGTCGCAACTCGCACTTTCCGGACTCCTCAACCGCCGTTGTCGACTCCGCCAACGGCCACACCCTCTCCTACGGCGAACTCATCCACCGCGCTGAGAACCTAGCGGCCAACCTCGCCACAGTTCTCAAACTGTCAAAAGCCCACACCGCGCTCGTTCTCTCCCCTAACATCATCCAAGTTCCGATCCTCTGCTTCGCCCTCCTCTCCCTCGGCGTGGTCGTCTCCCCCGCGAACCCTCTTTCCACGCGCTCCGAGATCACGCGCCTCTTCCACCTCAGCAAACCCGCCATCGTCTTCGCAGTGACTTCAAACGCAGAAACAACACGCGAGTTCCATGTCCGTACGGTCCTCCTCGACTCGCCTGAGTTCGACTCGCTCACCAGGACAAAGATACAGCCTCTAAGTCCAACCGCGTCCCCCACGCCGGTGACTCAGTCCGACGTGGCAGCGATTCTGTACTCTTCCGGCACGACGGGAAAGATGAAGGGCGTTATGCTTACTCACCGCAACCTAACCGCAGTAGCCGCGGGATACGACACGGTCCGCACGAAGCGCGCGGAGCCCGCGGTGTACCTCTATACGGTGCCGTATTTCCACGTTTACGGTTTCACCTTCAGCCTGGGGGCGATGGTGCTGTCGGATACGGTGGTGATAATGGAGAGGTTCAGTTTTAGGGGCATGCTGAGCGCCGCGGAGAGGTTCCGAGTGACGCACATTACGGTGGTGCCGGCACTGGTAGTAGCTATGACGAAGGACAAAGTGATAGACGGATACAATTTGACGTCTTTGGAAGGGATCGTTTGCGGTGGCGCTCCACTGAGGAAGGAAACCGATGAAGCTTTCAAAGCCAAGTTCCCCAAGGTCCTCGTCATGCAGGGATACGGTTTAACTGAATCTGTGGTAACCCGAACCACTCCCGAGGAAGCTAATCACGTGGGAACGGTGGGTAGACTGAAACCAGACATAGAAGCAAAAGTTGTTAACCCACAAACAGGGAAACTCATGTTTCCCGGTGAAAAGGGGGAACTATGGATCAAAGGACCTTATGTTATGAAAGGTTATGTTGATGATCCAGAAGCAACTTCAGCAACTTTGGTGAATGGATGGTTAAGGACTGGAGACCTTTGTTATTTCGATAATGATGGTTTTTTATATATTGTTGATAGGTTAAAAGAGTTGATCAAATACAAGGGCTACCAGGTTGCTCCAGCAGAGCTAGAAGAGTTGCTCCTATCTCATCCAGATATACTTGATGCTGCAGTTATTCCATACCCTGACAATGAAGCAGGCGAAGTGCCCATGGCGTTTGTTGTGAGACAACCTCAAAGTTCCCTTGGCGTAGCACAAGTTATTGATTTTGTTGCCAAACAGGTTACACCATACAAGAAAGTAAGGCGTGTAGCATTTGTTGATTCCATTCCCAAGAATGCTTCAGGAAAGATTCTGAGAAAGGATTTAAGAAAAGTTGCGCTCTCTAAGTTATAA 1638 0.5183 MEKKMEATFPPVTDLRSGFNPASRTFHSLKSPLLLPPPNAAISAASYVLFLRRNSHFPDSSTAVVDSANGHTLSYGELIHRAENLAANLATVLKLSKAHTALVLSPNIIQVPILCFALLSLGVVVSPANPLSTRSEITRLFHLSKPAIVFAVTSNAETTREFHVRTVLLDSPEFDSLTRTKIQPLSPTASPTPVTQSDVAAILYSSGTTGKMKGVMLTHRNLTAVAAGYDTVRTKRAEPAVYLYTVPYFHVYGFTFSLGAMVLSDTVVIMERFSFRGMLSAAERFRVTHITVVPALVVAMTKDKVIDGYNLTSLEGIVCGGAPLRKETDEAFKAKFPKVLVMQGYGLTESVVTRTTPEEANHVGTVGRLKPDIEAKVVNPQTGKLMFPGEKGELWIKGPYVMKGYVDDPEATSATLVNGWLRTGDLCYFDNDGFLYIVDRLKELIKYKGYQVAPAELEELLLSHPDILDAAVIPYPDNEAGEVPMAFVVRQPQSSLGVAQVIDFVAKQVTPYKKVRRVAFVDSIPKNASGKILRKDLRKVALSKL* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0814 545 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Vra7g0814 545 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 14 541 - -
Vra7g0814 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Vra7g0814 545 Pfam AMP-binding enzyme 53 447 IPR000873 -
Vra7g0814 545 Gene3D - 37 442 IPR042099 -
Vra7g0814 545 SUPERFAMILY Acetyl-CoA synthetase-like 50 542 - -
Vra7g0814 545 Gene3D - 443 543 IPR045851 -
Vra7g0814 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 541 - -
Vra7g0814 545 CDD 4CL 54 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0814 Vra-Chr7 16667700 16680619 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0814 12 542 Monolignol Biosynthesis Gene Families AT5G63380 48.007 5.32e-176 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0814 - - gmx:100784234 831.632