Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0812 ATGAACAATAGAACAAGAGTAATAGATCCAAAGAGCGGCTTCAACCGCGTTTCCAGAACCTTCCACAGCCTCAAACCACCATTCCCCCTCCCTGCGCCCAATGCTGCCGTCTCTGCCGTATCATACGCCCTCTCCCTCCGCCGTAATTCGTCGTTTCCAGACTCTGTCACTGCCATCGTAGACGCCGCCACCGGCCGCAATATATCCTACGAAGAACTCATCCACCGTGCCGAAACCCTAGCCGCAAACCTCGCTACAGTTCTCAAACTCTCCAAAGGAGACGTCGCGTTCGTTCTCTCCCCAAACCTTATCCAAGTTCCCATCCTTTACTTCGCGCTCCTCTCCCTCGGCGTCATCGTCTCCCCCGCGAATCCTCTCTCCACGCGCTCCGATCTCACGCACCTCTTCCACCTCAGCAAACCCGCAATCGTCTTCACAGCGACTTCAATCGCGGAGCGCGATTTTGGTGTCCGTACGGCTCTCCTCGACTCCCCCGAGTTCGACTCCCTCACTCGGACGAAGATTCACAATCCGAGTCCACTGGCATCCCCTGCGCGAGTGGCTCAATCTGACGTGGCAGCGATTCTGTACTCCTCGGGGACGACGGGGATGGTAAAGGGCGTGATGCTCACGCACCGTAACTTAACAGCGTTAGCCGGGGGATTCCACGCCGTTGGAGTGAAGAGAAAGGAGCCCGCGGTGTTCTTGTTCACGATGCCGTTTTTCCACCTGTTCGGCTTCACCTACAGCTTCAAGGCGATGGTTCTGTCGGAGACGGTGGTGATAATGGAGAGATTCAGTTTGAGGAGAATGCTGAGCGCCGTTGAGAGGTTCCGGGTTACAAATCTTGCGGTGGTGCCGTCGCTGTTGGTCGCTTTGACGAAGGATAGTGTCACCCACGAGTACGATTTGAGGACGTTAGAGGGGATTGCATGCGGCTCGGCTCCACTTGGAAAGGAAACCGCCGAGGCTTTCAAAGCCAAGTTCCCCAAAGTCGTAGTTCTCCAGGGATATGGTTTAACCGAAGCAGGTGCTGCGGTTGCCAGAACCTTTGTTGAAGATGCTAAGCAACCGGAAACAACAGGTAAACTGCTATCGAGGGTGGAAGCCAAAATTGTGAATCCAGAGACAGGAGAAGCCATGTTTCCAGGTGAACAGGGAGAACTCTGGCTCAAATCACCTACTATTATGAAAGGTTATGTTAACGAGCCAGAAGCAACCTCAGCAACTTTAGTGAATGGGTGGTTAAGGACTGGAGACCTTTGTTATTTCGATAATGATGGTTTCTTGTATGTTGTTGATAGGTTAAAGGAGTTGATCAAATACAAGGGCTACCAGGTTGCTCCAGCGGAGTTAGAAAAATGGCTCCTGTCTCACCCAGAGATAATTGATGCTGCAGTTATTTCATACCCTGATGAAGAAGCTGGGCAAGTTCCAATGGCGATCGTAGTAAGACAACCCCAAAGTTCCCTCGCTGAAGCAGAAATAATCGATTTTGTCGCCAAACAGGTTGCACCATACAAGAAAATAAGGCGCGTAGCATTTGTGGACGCAATACCGAAGAATGCCTTGGGAAAGACACTGAAGAGTGACTTGAAAAAACTTGCTTCCTCTAGATTATAA 1623 0.5145 MNNRTRVIDPKSGFNRVSRTFHSLKPPFPLPAPNAAVSAVSYALSLRRNSSFPDSVTAIVDAATGRNISYEELIHRAETLAANLATVLKLSKGDVAFVLSPNLIQVPILYFALLSLGVIVSPANPLSTRSDLTHLFHLSKPAIVFTATSIAERDFGVRTALLDSPEFDSLTRTKIHNPSPLASPARVAQSDVAAILYSSGTTGMVKGVMLTHRNLTALAGGFHAVGVKRKEPAVFLFTMPFFHLFGFTYSFKAMVLSETVVIMERFSLRRMLSAVERFRVTNLAVVPSLLVALTKDSVTHEYDLRTLEGIACGSAPLGKETAEAFKAKFPKVVVLQGYGLTEAGAAVARTFVEDAKQPETTGKLLSRVEAKIVNPETGEAMFPGEQGELWLKSPTIMKGYVNEPEATSATLVNGWLRTGDLCYFDNDGFLYVVDRLKELIKYKGYQVAPAELEKWLLSHPEIIDAAVISYPDEEAGQVPMAIVVRQPQSSLAEAEIIDFVAKQVAPYKKIRRVAFVDAIPKNALGKTLKSDLKKLASSRL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0812 540 Gene3D - 438 539 IPR045851 -
Vra7g0812 540 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 9 536 - -
Vra7g0812 540 Pfam AMP-binding enzyme 51 442 IPR000873 -
Vra7g0812 540 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Vra7g0812 540 CDD 4CL 49 532 - -
Vra7g0812 540 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Vra7g0812 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 536 - -
Vra7g0812 540 Gene3D - 31 437 IPR042099 -
Vra7g0812 540 SUPERFAMILY Acetyl-CoA synthetase-like 48 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0812 Vra-Chr7 16611031 16631337 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0812 3 536 Monolignol Biosynthesis Gene Families AT5G63380 48.825 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0812 - - vun:114182486 909.442