Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0811 ATGTTCCAAGGTGGTACAATGAGACAGTTTTGCTACCTTTATCTTGTTGTTCTTTCATGGTTCTTTTTCATCCCAAACACTTATGGGTTACAAGTTGCTCAGACACAAGCATTATTGCAGCTAAGAGTTCATCTAGAGTATCCCTCTTCTTTACAGATATGGGAATATTACCAGGGGGACCTTTGTACGCTCTCTCCGTCTGCAAACCTGAGCATTAAATGTGAAGATGATGAGGTAACTGAGCTTAAAATTACGGGTGAGAAATCTTTGAAGCCACCACGGTTCAATGGATATGCAGTTCCTAATCACACTCTATCCATGAATTTCTCCATTGATTCCTTTTTCATCACTTTGACAGAGTTGACCACCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAAGATTCACAGTTTCACTTTGCTTCAAGTTTTGGACTTGAGTTCCAATTTCTTATTTGGAGCCATTCCACCAAAAATATCCACAATGGTAACGCTTCACACACTGACCCTTGATGACAATTATTTTAACACCACTATGCCCGATTCCTTTGATTCTCTGTCCAATCTGAATATCTTGAGTATGAAGAGCAATGGCTTAAAGGGTTCATTCCCCTCCTCACTGGGAAAAATCAAGACACTTGAAGTTATTTCCTTGTCCCACAATGAGTTGTCTGGTGACCTGCCTGGTCTCAGTTCTCTCACTGGCCTACATGTTCTGGATTTGAGAGAAAACCATTTAGAATCTGAACTACCATTGTTGCCAAAATCTGTGGTCACTGTGCTGCTTAGCAATAACTCATTTTCAGGAGAGATACCTAAGCAGTTTCAAGAACTGGATCAGCTTCAACATCTTGATCTTTCTTCAAATTTTCTCAGTAAGACACCCCCATCTGCCTTGTTTTCTCTGCCAGAAATAAGTTATTTGAATCTGGCAAGCAATGTGCTAAGTGGGACCTTCCCAGACAAACTTAACTGTGGTAGCAAACTTGGGTTTGTGGATATTTCTCGTAACAAGTTAAGTGGTGGACTTCCTTCTTGCTTGGCGAATACATCTGACAGTAGAGTTGTTAGATATGCTGGAAACTGTCTATCTGTTGACTCTCAGAACCAGCACAGAGGGTCTTATTGCAAAGAATCCACCTCTGGATGGAAAAGCTTCAAGACATGGGAAGTAGCTGTAGTAATGGCCATCATTGTTGTACTTGTTCTTGTGCTTTTGGTTTCTAGCGTCTTCTTATGGAGAAAGTACCATTCCAGAAAGACAACTGGGCAACATAACTCCTCAATAGCAGTTCCGTCAGAGATCCTTGCAAATGCCAGATTTATTTCTCAAACAGTGAAGCTAGGGACACAAACTATTCCAACCTGTCGGCAATTTTCAATAGAGGAGTTGAAGGAAGCCACAAAAAACTTTGATTTGTCGACATATATTGGTCAAGGCTCCATGGGGAAGATGTACAAAGGTAAACTGGAGAATGGATCCTATGTGGCAATACGGTCTTTGGCTCTGTCAAAGAAATGCTCAATTCAAACTCTCAGAGCTAAATTGGATTTACTCTCAAAACTTCATCATCCAAATTTGGTTAGCCTTTTGGGTCATTGTATTGATGGTGGAGGACAAGATGATTTCAATTCCCATAAACTTCATCTTGTGTATGAGTATGTGCCAAATGGGAATTATCATGCCCATCTCTCAGAATTTTCTGTAGGGAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTGATTGGAGTTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATACCTGGCTGCTTTAGTAACCTACTGAAGACAAAAAATGTCTTGCTTGATGAATACCGTTTTCCGAAACTAAGTGACTATGGTATGTCCATCATCATAGAAGAAATTGAAAAGTTTGAGGCAAAGGGCGAGAAATCAAAGCCATGCCTAAGGACAAAAGCAGATGATGATGTTTATAATTTTGGATTCATCCTGTTCGAATCACTTGTTGGACCCATAGCATGCGACAGAGGTGAAACATTTTTCCTAAATGAAAAGGCATCGTTTGGGAGTCAAGATGGTAGAAGAAAGATTGTGGATCCTATAGTGTTGACCACTTGCTCTCAAGAGTCTTTATCAATTGCAATATCAATAACAACCAAATGCATTTCTCCAGAATCTTCATTTCGTCCCTCTTTTGAGGATGTCTTATGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGATTCAGACCACAAATCAGACTAA 2283 0.4052 MFQGGTMRQFCYLYLVVLSWFFFIPNTYGLQVAQTQALLQLRVHLEYPSSLQIWEYYQGDLCTLSPSANLSIKCEDDEVTELKITGEKSLKPPRFNGYAVPNHTLSMNFSIDSFFITLTELTTLRVLSLVSLGIWGPLPDKIHSFTLLQVLDLSSNFLFGAIPPKISTMVTLHTLTLDDNYFNTTMPDSFDSLSNLNILSMKSNGLKGSFPSSLGKIKTLEVISLSHNELSGDLPGLSSLTGLHVLDLRENHLESELPLLPKSVVTVLLSNNSFSGEIPKQFQELDQLQHLDLSSNFLSKTPPSALFSLPEISYLNLASNVLSGTFPDKLNCGSKLGFVDISRNKLSGGLPSCLANTSDSRVVRYAGNCLSVDSQNQHRGSYCKESTSGWKSFKTWEVAVVMAIIVVLVLVLLVSSVFLWRKYHSRKTTGQHNSSIAVPSEILANARFISQTVKLGTQTIPTCRQFSIEELKEATKNFDLSTYIGQGSMGKMYKGKLENGSYVAIRSLALSKKCSIQTLRAKLDLLSKLHHPNLVSLLGHCIDGGGQDDFNSHKLHLVYEYVPNGNYHAHLSEFSVGKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNLLKTKNVLLDEYRFPKLSDYGMSIIIEEIEKFEAKGEKSKPCLRTKADDDVYNFGFILFESLVGPIACDRGETFFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISPESSFRPSFEDVLWNLQYAAQVQATADSDHKSD* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0811 760 Gene3D Ribonuclease Inhibitor 31 263 IPR032675 -
Vra7g0811 760 ProSiteProfiles Protein kinase domain profile. 478 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0811 760 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 5 760 - -
Vra7g0811 760 Pfam Protein tyrosine and serine/threonine kinase 480 739 IPR001245 GO:0004672|GO:0006468
Vra7g0811 760 ProSiteProfiles Leucine-rich repeat profile. 219 241 IPR001611 GO:0005515
Vra7g0811 760 PANTHER OS07G0166700 PROTEIN 5 760 IPR045272 GO:0004714|GO:0006468
Vra7g0811 760 SUPERFAMILY Protein kinase-like (PK-like) 459 743 IPR011009 -
Vra7g0811 760 ProSiteProfiles Leucine-rich repeat profile. 287 308 IPR001611 GO:0005515
Vra7g0811 760 Gene3D Transferase(Phosphotransferase) domain 1 562 760 - -
Vra7g0811 760 SUPERFAMILY L domain-like 89 371 - -
Vra7g0811 760 Gene3D Phosphorylase Kinase; domain 1 450 561 - -
Vra7g0811 760 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Vra7g0811 760 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Vra7g0811 760 Gene3D Ribonuclease Inhibitor 264 376 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0811 Vra-Chr7 16588760 16593972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0811 7 688 Miscellaneous Gene Families AT5G14210 54.429 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Vra7g0811 PK_Tyr_Ser-Thr 2.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0811 - - gmx:100799183 1269.6