Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0793 ATGGTGAACGAAGGTAGTTGTCTCCCCACGATGGATCTGCTAAGGTCGGAGCCAATGCAAATGGCTCAATTGATCATTCCAATCGAATCAGCTCATCGAGCCATCTCTTACCTTGGCGATCTCGGCCTCTTCCAATTCAAAGATCTCAATGTAGATAAAAGTCCATTCCAGCGAACTTATGCTTCTCAGATTAAACGATGTGGGGAAATGGCGCGTAGGCTACGGTTGTTTAAGGACCAAATGTTTAAAGCAGGCGTGTCACCCTCAACGAGCTCAGCAAGAAAGGATAATGTTGATCTGGAAATTTTGGAGGTTAAACTTGGAGAACTTGAAGCTGACCTCCTTGAGATTAATGCAAATAATGAGAAGTTGAAACACACCTACAATGAGCTATCGGAGTATAAGCTTGTTCAAGAGAAGGTTGGTGAATTTTTCTCTTCAGCAAAAACTAATGCCGTAGCTCAACAGAGAAAGCTTGAAGTCCAGATAACTGTTGAAAGGTCTATTGACAGCCCATTACTATTGGAACAGGAGGAGACGTCAACAAAGCAAATTAAGCTGGGCTTTATCAGTGGACTTGTTTCAAGGGAAAAATCAGTTCCTTTCGAAAGAATTCTATTTCGTGCTACTAGGGGAAACGTGTTTCTCAAACAGGCCGTGGTTGATCATTCTGTTCTTGATCTTTCGTCACAGGAGAAGGTTCATAAAAATGTATTTGTCGTTTTTTATTCTGGAGAGAGTGTTAAAAGTAAAATTCTGAAAATATGTGATGCTTTTGGAGCAAATCGTTATCCTTTCTCAGATGACTTGAGTAAACAACTTCAGACAATAACAGAGGTTTCAGGAAGACTTTCAGAATTGAAGACTACAATAGATGCAGGATTGCTTCACCGGAGCACTCTATTGCAGACAATAGCAGATCACTATGAGCAGTGGAGTCTTAAGCTGAAGAAGGAAAAATCAATTTATCACACTCTAAATATGCTTAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGCCAGATTCACAAAGTGTTGCAGCAGGCAACTGTGGAATGCAGTTCTCAAGTTGAGGCCATATTTCAGGTCTTAGAGACAAAGGAATCACCGCCTACCTACTTCTGCACAAACAAATTCACTTCTGCTTTTCAAGAAATTGTAGATGCCTATGGAGTCGCCAAGTACCAGGAAGCAAATCCCGGTGTGTACACAATTATCACGTTTCCATTCCTTTTTGCTGTAATGTTTGGTGACTGGGGGCATGGCATATGCCTATTACTGGCGGCTTTGTATCTCGTAATCAGAGAGAAAAAATTTTCAAGTCAGAAACTTGGAGACATAATGGAAATGGCTTTCGGTGGACGCTATATTATTATGATGATGGCACTCTTTTCAATCTATACCGGGTTGATATATAATGAGTTCTTCTCTGTTCCATTTGAATTATTTGCTCCATCTGCCTATGGATGTCGTGATTCTTCATGCGGGGATGCTTCTACAACAGGTTTGATAAAAGTGCGTGACACTTATCCATTTGGTGTGGATCCTAAATGGCACGGTACTCGGAGTGAACTCCCTTTTCTCAATTCTTTGAAGATGAAGATGTCAATTCTGTTGGGCGTATCCCAGATGAATCTTGGAATCATAATGAGTTACTATAATGCAAAATACTTCGAAAACGATATAAATATCTGGTACCAGTTCGTTCCCCAGATGATATTCTTAAATAGCATGTTTGGCTACCTTTCACTCCTAATAATTGTAAAATGGGGCACTGGGTCACAGGCTGACCTGTATCATGTACTTATATACATGTTCCTTAGCCCAACTGATGATTTAGGTGAAAACCAGCTTTTTTTTGGTCAAAAGCTCCTTCAACTTGTGTTACTACTGTTGGCACTTGTTGCCGTACCATGGATGCTAGTACCAAAGCCCTTTCTCCTGCAGAAGCAACATAAAGAAAGGCATCGAGGTCAATCTTACTCTTTGTTGTTCAACAAGGATGATCCTGATGAATCAGAATTACAAAGTGTTCCCAATAATATCGATGATGAGTTTGACTTCAGCGAGGTTTTTGTGCACCAACTTATACATACAATCGAATTTGTGCTTGGAGCTGTGTCTAATACAGCTTCGTATCTACGTTTGTGGGCCCTTAGCTTAGCTCATTCCGAGTTGTCCAGTGTTTTCTATGACAGAGTTCTACTTTTGGCCTGGGGGTACAATAACACTATTATTCTCGTTGTTGGCATTTTTGTTTTTATCTGTGCAACTGTTGGTGTGTTATTGTTAATGGAAACTCTAAGTGCTTTCTTGCATGCTTTGAGACTTCACTGGGTAGAGTTCCAGAACAAATTTTACGAGGGAGATGGTTACAAGTTCTTTCCGTTTTCATTTACATTGCTTACGGATGAGGATGATCTGTAA 2457 0.4042 MVNEGSCLPTMDLLRSEPMQMAQLIIPIESAHRAISYLGDLGLFQFKDLNVDKSPFQRTYASQIKRCGEMARRLRLFKDQMFKAGVSPSTSSARKDNVDLEILEVKLGELEADLLEINANNEKLKHTYNELSEYKLVQEKVGEFFSSAKTNAVAQQRKLEVQITVERSIDSPLLLEQEETSTKQIKLGFISGLVSREKSVPFERILFRATRGNVFLKQAVVDHSVLDLSSQEKVHKNVFVVFYSGESVKSKILKICDAFGANRYPFSDDLSKQLQTITEVSGRLSELKTTIDAGLLHRSTLLQTIADHYEQWSLKLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATSQIHKVLQQATVECSSQVEAIFQVLETKESPPTYFCTNKFTSAFQEIVDAYGVAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLAALYLVIREKKFSSQKLGDIMEMAFGGRYIIMMMALFSIYTGLIYNEFFSVPFELFAPSAYGCRDSSCGDASTTGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIIMSYYNAKYFENDINIWYQFVPQMIFLNSMFGYLSLLIIVKWGTGSQADLYHVLIYMFLSPTDDLGENQLFFGQKLLQLVLLLLALVAVPWMLVPKPFLLQKQHKERHRGQSYSLLFNKDDPDESELQSVPNNIDDEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDRVLLLAWGYNNTIILVVGIFVFICATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFTLLTDEDDL* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0793 818 Coils Coil 100 127 - -
Vra7g0793 818 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
Vra7g0793 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 11 818 - -
Vra7g0793 818 PANTHER VACUOLAR PROTON ATPASES 11 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vra7g0793 818 Pfam V-type ATPase 116kDa subunit family 37 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0793 Vra-Chr7 16212141 16236541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0793 11 817 Primary Pumps ATPases(2) AT4G39080 73.267 0.0 1235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0793 K02154 - gmx:100805813 1423.68