Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0792 ATGGCACACCTGAACCAGCCATTGATAGTCACTTTCCTTTCTATCCTTTTATGTCTTGCTGCAGTTGATCCATCTTTGGCTCTGCAGAAACCCTCAAACCAAAACCAAACAATGACTTACATAGAGTCCTCTTGCCAAGGAACAAGGTTCCCTGATCTGTGCATACGTTGCCTAGCCAGATTTTCAAATTCCACCATTGATGGCCCTCAGCACTTGGCCCATATTGCCCTTTCGGTGAGCCTCTTAAGGGCACTAAAAACTAGGGCATACTTGTTAAAAGTGGCCAAGGAACTTGAAGGGTTCAAGAATGATAGAGTGTACCTTACTGTGCAAGATTGTGTAATGCAACTGAATGATAGTGTTGACCAACTTTGCCAATCCATCAAAGAGCTCCGCAGGATAAACAAAAGCACCATCATAGATGACAACTTATTGTGGCACATAAGTAATGTTGAGACATGGGTAAGCACTGCCTTAACAGATGCTAGCTATTGTGTTCAATCGTTCCCTGGAACAAAGATGAGTAAGAGGACTGCTACTATAAAGTTTAAGGCACAAAATGTTGCAGAGGTCACTAGTAATGCACTGAATTTATTTCACAGATATGCTTCTAGTTACCATGTAGCAGCTAGAGCCACCATGAAACCCTAA 651 0.424 MAHLNQPLIVTFLSILLCLAAVDPSLALQKPSNQNQTMTYIESSCQGTRFPDLCIRCLARFSNSTIDGPQHLAHIALSVSLLRALKTRAYLLKVAKELEGFKNDRVYLTVQDCVMQLNDSVDQLCQSIKELRRINKSTIIDDNLLWHISNVETWVSTALTDASYCVQSFPGTKMSKRTATIKFKAQNVAEVTSNALNLFHRYASSYHVAARATMKP* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0792 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 202 IPR035513 -
Vra7g0792 216 Coils Coil 114 134 - -
Vra7g0792 216 CDD PMEI-like_3 43 204 - -
Vra7g0792 216 Pfam Plant invertase/pectin methylesterase inhibitor 40 198 IPR006501 GO:0004857
Vra7g0792 216 PANTHER BNAANNG18590D PROTEIN 4 206 - -
Vra7g0792 216 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 201 IPR006501 GO:0004857
Vra7g0792 216 SMART PMEI_2 36 198 IPR006501 GO:0004857
Vra7g0792 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 206 - -
Vra7g0792 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0792 Vra-Chr7 16190661 16191615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0792 24 199 Carbohydrate Esterase AT3G49220 28.333 2.52e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0792 - - ccaj:109789012 333.569