Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0777 ATGGACTCCAACACTATCGTTTCATGGCCGAGGATGTCAGAAAACATTGAGGGTTTTGCCCTCTCACCCAACAAATCCGAAGAGGTTCATGTTTTAGCAGTTGATGACAGCCTCGTTGATCGCAAAGTCATCGAACGCTTGCTCAAAGTCTTAGCTTGCAAAGTTACTGCTGTTGATAGTGGGCTGAGAGCACTGCAATTGCTTGGACTATTGGACGAGCAGAAAATTCCCTCTGAAACTAATGGTTTTGCTGGTTTAAAGGTGGATCTAATTATCACAGACTACTGCATGCCTGGAATGACGGGTTATGAGTTACTGAAGAAAATCAAGGAATCGTCCACTTTCAAGGAAACTCCTGTGGTGATTATGTCCTCTGAAAACGTTTTGCCACGCATAGACAGATGTTTGGAGGAGGGTGCAGAGGATTTCATAGTTAAGCCTGTGAAGTTATCTGACGTTAAGCGTTTGAAGGATTACATGACAACAAAGGAGGCTAAGGTTGAAGGCCAAGACAGGGAAGGGATTCTCAAAAGGAAGCTCTTAGACACTTCTGACGTCTCATCATCATCACCACCGTCAATTTCCTCATCATCTTCACCCTCAGTGATTGACTCTCCAATCAGACGGCTTAAAATGACCAGCACTGATTGA 651 0.4424 MDSNTIVSWPRMSENIEGFALSPNKSEEVHVLAVDDSLVDRKVIERLLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFAGLKVDLIITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTTKEAKVEGQDREGILKRKLLDTSDVSSSSPPSISSSSSPSVIDSPIRRLKMTSTD* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0777 216 Gene3D - 29 194 - -
Vra7g0777 216 SMART REC_2 29 160 IPR001789 GO:0000160
Vra7g0777 216 MobiDBLite consensus disorder prediction 182 216 - -
Vra7g0777 216 MobiDBLite consensus disorder prediction 178 216 - -
Vra7g0777 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 206 IPR045279 GO:0009736
Vra7g0777 216 SUPERFAMILY CheY-like 29 156 IPR011006 -
Vra7g0777 216 CDD REC_typeA_ARR 31 156 - -
Vra7g0777 216 ProSiteProfiles Response regulatory domain profile. 30 161 IPR001789 GO:0000160
Vra7g0777 216 Pfam Response regulator receiver domain 31 153 IPR001789 GO:0000160
Vra7g0777 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 9 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0777 Vra-Chr7 15707661 15709093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0777 23 208 Response Regulator Gene Family AT1G59940 58.852 4.88e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra7g0777 Response_reg 1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0777 K14492 - gmx:100527828 337.806