Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0776 ATGGCCATGGCTTCCTATCTATTATATCTCTTCTTTAGCTTCCTCACTTTGGCAAGTAGTGACACAAATTATATAAACGACCGACCAATATCTACAGAAGATCCAACAGAGACTGCATCACCAAGAGCAGCAACAAAATTATCACGAACCCTCACTGACTATCTACGCCTAAGTTGCTCCAGCGACACAATTTCTGGCACTGTCTTCAAATCCAACCTTAACACGCTCCTATGGAAGTTATCTAACGCCACCACCGACAACGGCTTCAACAAAACCACAGTCCCCGGAGAAAACCCCTCAGACTCAGTCTTTGGCTTGTTCATGTGCAGCGGTGACGTTCCCTCTCAGCTTTGTCGACAATGCGTCCAAAAAGCAGCCCAACAGTTAACGCTAGACTGCTCTTCCTCCTCACAAGCTCTCATTTGGTACGATGACTGCATGCTTCGTTATTCCAACTACTCATTCTTCTCCACCTTCGACACAAAACCTAGCTTTGCCCTAAGAAGCACTGTCAACATCTCTAACGAGGAAAGCTTCACGCTTTTATTATTTCGGACCATGAACAAGACTGCAGATCAAGCAGCCCATTCGCTTCTTCCTATCAGTGGCAAGAAGTTTGCCACAAAGCAAGCAAACGTGTCTGGATTTCAGAGGCTTTATTGTCTGGCGCAGTGCACTCCCGACTTGTTACCCAATGATTGCAGAAGCTGTCTGGATGCAGCCATAGGGGAACTTCCGCGGTGCTGCGGAGGGCGACAAGGAGGGAGAGTTTTATATCCCAGTTGTTTTGTTAGGTATGAATTGTACCCTTTTTATCGCTCCCTTCTTCCCTCGCTGTCGGTTCCTATTCCTGCATCAAATTTTTCAGACGCAGACTCGCAATATTCCAAAAATCCAACTTATCTTCACCACAATTGCTCAGCTGATTCAACTGCTGACAGCGCTTTCAAGGAGGATCTCAAGACCCTTTTCTCTTATTTGTCTTCCAAAACTACTAACTCATACTACAAGGACAGTGTCGACGAGAATGTGGACGGCTTCTTCATGTGCCGTGGTGACCTTCCCTCTCAACTTTGTCAACAATGCGTCCTAAACGCAACCAGTTATATATCTTCACGCTGCAATTCTTCTAAAGAGGCTATAATTTGGTTCAGCCACTGCATGCTGCGCTATTCTAACAACTCTTTTTTCTCCCGCGTGGAAAAAATTCCAATGTTTCAAGTGTTGAATGTTACCACTAGCTCTAGCCCCATCCCTGGCCAAGACTTCTTCACTTACTCATTATCAACTGCTTTAGCTAGTCTGGCAGATGAAGCAGGAGATACTGCAGAGAAATATATAACTAAATCATTAGCATTAAATGATGTACAGACCCTTTACACTCTTGGTCAGTGTACGCAGGATTTGTCCAGTCGCGACTGTGAGCGCTGTCTAGCAGATCTAAATGGAAGAATTCCGTGGTCAAACTTGGGAAGCGTTGGGGGAAGAGTTCTATATCCAAGCTGCAACATCAGGTTTGAATTATTCCAATTTTACATGGCTGATGCTGACGCAGCTGAACCGCCTAGTTCGATTAACCATACTTCTCCATTTCCTCTTCATGTTGGTCATGAAAGTGTAGCTTTAGAGCCCTTCCAATTCAAGTTATCTGTAATTGAGGCCGCGACCAACAACTTTTCACAGGAAAATAAAATAGGTAGAGGTGGATTTGGAGAAGTTTACAAAGGTGTTCTTGATGGAAGACAAATAGCGGTGAAACGACTTTCAATAAGATCTAGACAAGGAGAAAATGAGTTCAAGAATGAAGTTTTATCGATAGTTAAACTTCAACATAGAAATCTTGTGGGATTCGTTGGCTTTTGTCTTGAAGAACGAGATAAAATACTAATTTATGAATATGTCCCAAACAAGAGTCTTGATTCCTTTTTATTTGGTATGACACTTGAATACCTTAATTTATTTTTATTTAACTCCATTTATAAACTCCCAAAACATATTTCACACTTACCTTTTTCAATTAAAATTGCAGATTCTCAAAGATCAAAGTTGTTAGGTTGGTATGAACGATACAATATTATAGTGGGCATTGCTCGTGGAATTCTTTACTTACATGAACAATCTAGACTCAAAGTTATACATCGAGATCTTAAACCTAGTAACATTTTATTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGGTTTGGCTAGAATTATAGAAATAAATCAAGATCAAAAGAGTACACACAACGTTGCTGGAACATATGGTTATATGTCTCCAGAATATTTAATTCTTGGACGATTTTCTGAGAAGTCAGATGTTTTTAGTTTTGGTGTTATGGTGCTGGAGATTATTACCGGAAAAAAGAATTCAAGTTCGTATGATTCCAATCGGATTACTTATGATCTCTTAAGTTATGTTTGGAGACAATGGAATGATCATGTCACACTTGATATACTAGATCCAAGTATGAAAGAAAATTTTTCCGAAATTGAAGTGAATAGATGTATTCAAATTGGTTTACTATGTGTCCAACCAAATCCTAATACTAGACCAACAATGACAGAAATTATTTCATATATTAGCAGTTACTTGATTGAGTTGCCAAGTCCACGAGAACCTGCATTTGGTAGGCTAGATAGACCAGGAGTTTTACAAGAGTCGAGTTCTAGTCAGTCTACAAATGGTTCTACTCTTAATGAAATTTCTATGAGTGAATTTCTTCCTCGATAA 2736 0.4002 MAMASYLLYLFFSFLTLASSDTNYINDRPISTEDPTETASPRAATKLSRTLTDYLRLSCSSDTISGTVFKSNLNTLLWKLSNATTDNGFNKTTVPGENPSDSVFGLFMCSGDVPSQLCRQCVQKAAQQLTLDCSSSSQALIWYDDCMLRYSNYSFFSTFDTKPSFALRSTVNISNEESFTLLLFRTMNKTADQAAHSLLPISGKKFATKQANVSGFQRLYCLAQCTPDLLPNDCRSCLDAAIGELPRCCGGRQGGRVLYPSCFVRYELYPFYRSLLPSLSVPIPASNFSDADSQYSKNPTYLHHNCSADSTADSAFKEDLKTLFSYLSSKTTNSYYKDSVDENVDGFFMCRGDLPSQLCQQCVLNATSYISSRCNSSKEAIIWFSHCMLRYSNNSFFSRVEKIPMFQVLNVTTSSSPIPGQDFFTYSLSTALASLADEAGDTAEKYITKSLALNDVQTLYTLGQCTQDLSSRDCERCLADLNGRIPWSNLGSVGGRVLYPSCNIRFELFQFYMADADAAEPPSSINHTSPFPLHVGHESVALEPFQFKLSVIEAATNNFSQENKIGRGGFGEVYKGVLDGRQIAVKRLSIRSRQGENEFKNEVLSIVKLQHRNLVGFVGFCLEERDKILIYEYVPNKSLDSFLFGMTLEYLNLFLFNSIYKLPKHISHLPFSIKIADSQRSKLLGWYERYNIIVGIARGILYLHEQSRLKVIHRDLKPSNILLDENMIPKISDFGLARIIEINQDQKSTHNVAGTYGYMSPEYLILGRFSEKSDVFSFGVMVLEIITGKKNSSSYDSNRITYDLLSYVWRQWNDHVTLDILDPSMKENFSEIEVNRCIQIGLLCVQPNPNTRPTMTEIISYISSYLIELPSPREPAFGRLDRPGVLQESSSSQSTNGSTLNEISMSEFLPR* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0776 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 290 518 - -
Vra7g0776 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 52 276 - -
Vra7g0776 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 536 904 - -
Vra7g0776 911 ProSiteProfiles Gnk2-homologous domain profile. 406 511 IPR002902 -
Vra7g0776 911 SUPERFAMILY Protein kinase-like (PK-like) 543 883 IPR011009 -
Vra7g0776 911 ProSiteProfiles Gnk2-homologous domain profile. 161 271 IPR002902 -
Vra7g0776 911 SMART serkin_6 559 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0776 911 CDD STKc_IRAK 565 862 - -
Vra7g0776 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Vra7g0776 911 Pfam Salt stress response/antifungal 306 393 IPR002902 -
Vra7g0776 911 Pfam Salt stress response/antifungal 422 507 IPR002902 -
Vra7g0776 911 Pfam Salt stress response/antifungal 65 153 IPR002902 -
Vra7g0776 911 Pfam Salt stress response/antifungal 174 269 IPR002902 -
Vra7g0776 911 ProSiteProfiles Gnk2-homologous domain profile. 298 396 IPR002902 -
Vra7g0776 911 MobiDBLite consensus disorder prediction 878 911 - -
Vra7g0776 911 MobiDBLite consensus disorder prediction 885 905 - -
Vra7g0776 911 ProSiteProfiles Protein kinase domain profile. 559 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0776 911 Pfam Protein tyrosine and serine/threonine kinase 561 860 IPR001245 GO:0004672|GO:0006468
Vra7g0776 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 52 276 - -
Vra7g0776 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 290 518 - -
Vra7g0776 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 536 904 - -
Vra7g0776 911 Gene3D Transferase(Phosphotransferase) domain 1 672 869 - -
Vra7g0776 911 Gene3D - 406 511 IPR038408 -
Vra7g0776 911 Gene3D - 163 271 IPR038408 -
Vra7g0776 911 Gene3D - 52 155 IPR038408 -
Vra7g0776 911 Gene3D - 298 396 IPR038408 -
Vra7g0776 911 ProSiteProfiles Gnk2-homologous domain profile. 51 155 IPR002902 -
Vra7g0776 911 ProSitePatterns Protein kinases ATP-binding region signature. 565 586 IPR017441 GO:0005524
Vra7g0776 911 Gene3D Phosphorylase Kinase; domain 1 533 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0776 Vra-Chr7 15674852 15680597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0776 305 911 Receptor kinase-like Gene Family AT4G38830 36.850 3.07e-129 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vra7g0776 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0776 - - gmx:100798426 1040.41