Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0733 ATGAGTTCGGGAAGCCATAGTGATAAGGAGAAGGAGAAGGAGAAGCAGAGGGTGAGCCGCACGTCGTTGATACTGTGGCATGCTCACCAAAACGACGCCGCAGCGGTGCGGAAGCTCCTGCAGGAGGATCCTTCGCTGGTGACGGCAAGGGATTACGACAACCGCACCCCGCTCCACGTCGCATCCCTCCATGGCTGGATCGACGTCGCTAAGTGTTTGATCGAGTTCGGCGCCGATGTCAACGCGCAAGATCGTTGGAAAAATACCCCTCTGGCGGATGCCGAAGGAGCTAAGAAGACTGATGTGATCGAGCTTTTGCAATCTCATGGAGGCTCGTCTTATGGGCAAACTGGTAGCCATTTTGAACCGAAGCCTGTTCCGCCGCCGTTGCCAAATAAGTGTGACTGGGAAATCGAACCTACCGAGCTTGACTTCTCCACCTCCACGAGAATTGGAAAGGGGTCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGAACACCAGTTGCTGTTAAACGGATTCTTCCATCTCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTGAAACTTCGACACCCAAATATAGTTCAGTTTCTTGGAGCTGTCACTGACAGGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGATAAAGGTGCACTTAGTCCAGCAACAGCTATCAACTTTTCCATGGATATTGTGAGAGGAATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGGGACCTAAAGCCAAGGAATGTTCTATTAGTCAATACTAGTGCTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATCACTGTCCAGAGTTCTCATGATGTATACAAGATGACCGGTGAAACTGGGAGCTACCGCTATATGGCTCCTGAAGTTTTCAAACATCGGAGATATGATAAGAAGGTTGACGTGTACTCCTTTGCAATGATTTTATATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATCTCGAGCCTTATGATGGAGCAAAACGTGCTGCTGAGGGTCAAAGGCCTTCATTTCGGTCAAAGGGTTATATCAATGAATTGCAAGAATTAACGGAGCAGTGTTGGGCTCATGACGTGAATCAGAGACCACCCTTCTTAGAGATCCTTAAACGTCTTGAAAAGATCAAAGAGAATTTACATTCAGATCATCACTGGCATTTGTTTGCATCATAA 1266 0.4589 MSSGSHSDKEKEKEKQRVSRTSLILWHAHQNDAAAVRKLLQEDPSLVTARDYDNRTPLHVASLHGWIDVAKCLIEFGADVNAQDRWKNTPLADAEGAKKTDVIELLQSHGGSSYGQTGSHFEPKPVPPPLPNKCDWEIEPTELDFSTSTRIGKGSFGEILKAHWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKDKGALSPATAINFSMDIVRGMAYLHNEPNVIIHRDLKPRNVLLVNTSADHLKVGDFGLSKLITVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVYSFAMILYEMLEGEPPFANLEPYDGAKRAAEGQRPSFRSKGYINELQELTEQCWAHDVNQRPPFLEILKRLEKIKENLHSDHHWHLFAS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0733 421 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 8 413 - -
Vra7g0733 421 ProSiteProfiles Ankyrin repeat profile. 53 85 IPR002110 GO:0005515
Vra7g0733 421 SMART ANK_2a 53 82 IPR002110 GO:0005515
Vra7g0733 421 SMART ANK_2a 86 115 IPR002110 GO:0005515
Vra7g0733 421 PIRSF ILK 1 421 - -
Vra7g0733 421 ProSitePatterns Protein kinases ATP-binding region signature. 151 172 IPR017441 GO:0005524
Vra7g0733 421 PRINTS Tyrosine kinase catalytic domain signature 220 233 IPR001245 GO:0004672|GO:0006468
Vra7g0733 421 PRINTS Tyrosine kinase catalytic domain signature 258 276 IPR001245 GO:0004672|GO:0006468
Vra7g0733 421 PRINTS Tyrosine kinase catalytic domain signature 374 396 IPR001245 GO:0004672|GO:0006468
Vra7g0733 421 Pfam Ankyrin repeats (3 copies) 21 84 IPR002110 GO:0005515
Vra7g0733 421 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 413 - -
Vra7g0733 421 Gene3D Transferase(Phosphotransferase) domain 1 225 418 - -
Vra7g0733 421 ProSiteProfiles Protein kinase domain profile. 145 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0733 421 SUPERFAMILY Ankyrin repeat 24 114 IPR036770 -
Vra7g0733 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Vra7g0733 421 Gene3D Phosphorylase Kinase; domain 1 137 224 - -
Vra7g0733 421 SUPERFAMILY Protein kinase-like (PK-like) 135 416 IPR011009 -
Vra7g0733 421 Gene3D - 2 121 IPR036770 -
Vra7g0733 421 ProSiteProfiles Ankyrin repeat region circular profile. 53 85 - -
Vra7g0733 421 Pfam Protein tyrosine and serine/threonine kinase 147 403 IPR001245 GO:0004672|GO:0006468
Vra7g0733 421 CDD STKc_MAP3K-like 151 403 - -
Vra7g0733 421 SMART serkin_6 145 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0733 Vra-Chr7 14842121 14849122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0733 10 421 MAP Kinase Kinase Kinase AT1G14000 83.738 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Vra7g0733 PK_Tyr_Ser-Thr 1.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0733 - - gmx:100793237 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g0733 7 14842121 14849122 Vra7g0733 7 14842121 14849122 ECH