Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0730 ATGGGAGAAAACTCGGAACGGCAATGGTGCATCAGTGACTTCGAAATCGGAAAGCCTCTTGGAAAAGGAAAATTCGGCAGAGTCTACGTCGCCAGAGAACGCAAGAGCAAATTTGTTGTTGCATTGAAGGTTATTTCTAAGGAGCAATTAGAGAAGTACAAAATCCATCATCAACTAAGGAGGGAGATGGAGATTCAGGTCAGTCTGAAGCATTCGAACGTACTTCGTCTATATGGCTGGTTTCATGACTCCGAGAACGTCTTCTTGATTCTGGAATATGCTCACAATGGAGAGCTTTACAAGGAGCTTAGCAGAAAAGGGCATTTCAGCGAGCAACAAGCTGCCACGTATATTTTAAGCCTCACAAAGGCATTGGCGTATTGTCATGATAAGCATGTTATTCACAGGGATATCAAGCCTGAAAATCTGTTGCTTGATCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCAGTACAGTCTAGAAGCAAAAGGCATACCATGTGTGGAACCTTGGATTATTTAGCACCCGAAATGGTAGAAAACAAAGCTCATGATTATGCAGTTGATAACTGGACTTTAGGTATCCTTTGCTATGAATTCCTTTATGGTGCTCCCCCATTTGAGGCTGATAGTCAAGTTGATACCTTCAAAAGGATAATGAAGGTTGACTTGAGTTTCCCCTCTACTCCTTATGTTTCTTCAGAAGCCAAACATCTTATTAGTCGGCTTCTGGTAAAAGACTCTTCACGAAGGCTCTCTCTTCAGAGGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCCTACAGGTGTCAGCAGCTAG 831 0.4248 MGENSERQWCISDFEIGKPLGKGKFGRVYVARERKSKFVVALKVISKEQLEKYKIHHQLRREMEIQVSLKHSNVLRLYGWFHDSENVFLILEYAHNGELYKELSRKGHFSEQQAATYILSLTKALAYCHDKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEADSQVDTFKRIMKVDLSFPSTPYVSSEAKHLISRLLVKDSSRRLSLQRIMEHPWIIKNANPTGVSS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0730 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0730 276 SUPERFAMILY Protein kinase-like (PK-like) 7 269 IPR011009 -
Vra7g0730 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0730 276 PIRSF ILK 3 269 - -
Vra7g0730 276 Gene3D Transferase(Phosphotransferase) domain 1 98 274 - -
Vra7g0730 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g0730 276 CDD STKc_Aurora 13 265 - -
Vra7g0730 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Vra7g0730 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Vra7g0730 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Vra7g0730 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 275 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0730 Vra-Chr7 14808886 14811369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0730 6 271 CBL-interacting serine-threonine protein kinases AT5G10930 39.194 5.94e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Vra7g0730 Pkinase 1.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0730 K08850 - gmx:100775802 509.99