Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0719 ATGGCTAGTGTCTTTCCCGCATGTTCAGGTTCTGCTTCTCTTTTTCAAGGCAGAAATTTCTTCCCCTTTGCAACCAAAGGGTCTTGTCTTCACCTCAAAAGATCACTCTCTGCCAAATGTGTAGCTTCTCTGGGAACTGAAATATCAGTGCCTCCAGCAGTTGACACTTTCTGGCAGTGGCTCAAGGAAGAGGGTGTTGTCTCCAGCAAAACACCAGTGAAGCCTGGTGTGGTGCCAGAAGGCCTAGGACTGGTTGCACTCAAAGACATTTCTAGGAATGATGTTGTGTTACAGGTGCCCAAGAGGCTGTGGATTAACCCTGATGCTGTGGCAGCTTCAGAGATTGGGAAAGTGTGTAGTGGATTGAAGCCTTGGTTGGCTGTTGCGTTGTTTCTGGTAAGAGAGAGGTCAAAGGATGATTCTCTTTGGAAGCACTACTTCAGTATTCTGCCCAAGGAAACTGACTCTACAATTTACTGGTCAGAGGAGGAGCTCTCTGAACTAAAAGGGACTCAACTGCTGAACTCAACACTGAGTCTGAAGGAGTATGTGAAGAGCGAATTTAGGAGGCTGGAAGAAGAAATTATACTCCCTAATAGGAAGCTTTTCCCTTCTCCTATTACAATTGATGACTTCTTCTGGGCATTTGGAATTCTAAGATCAAGGGCATTTTCTCGCCTTCGCAATGAAAATCTAGTTGTGATTCCATTAGCTGACTTGATAAACCATAGTGCCAGAGTAACTACAGAAGATCATGCTTATGAAATTAAAGGAGCAGCAGGTCTTTTCTCCTGGGATTACCTATTTTCCCTAAGGAGTCCCCTTTCTCTCAAGGCTGGTGACCAGGTGTATATCCAATATGATTTGAATAAAAGCAATGCTGAGCTGGCTCTGGACTACGGTTTCATTGAACCAAATGCAGACCGGAATGCATATACCTTGACACTGCAGATATCTGAGTCAGACCCCTTTTTTGGTGATAAATTAGACATTGCTGAGTCCAATGGTTTCGGTGAGACAGCATACTTTGACATCTTCTACAACCGCCCACTTCCACCGGGGCTGCTTCCATATCTGAGACTAGTAGCTCTAGGGGGCACTGATGCTTTCCTTTTAGAGTCAATATTTAGAAATTCCATTTGGGGTCATCTTGAATTGCCTGTGAGCCGTGACAATGAGGAGCTAATATGCAGAGTGATTAGAGAGACCTGCAAAACTGCCCTTGCTGGTTATCATACAACCATTGAAGAGGATCAGAAGTTGAAAGAAGCTAAGCTAGATTCAAGGCTTGCTATAGCAGTGGGAATTAGAGAAGGGGAGAAGCAGCTCCTGCAACAAATTGACGAGATCTTTAAGGAGAAAGAATTGGAATTGGCCCAGTTAGAATATTATCAGGAAAGGAGGCTCAAGGACCTTGGACTTTGCGGGGAAAGTGGCGATATCCTTGGGGACCTTGGAAAATTCTTTTAG 1470 0.4449 MASVFPACSGSASLFQGRNFFPFATKGSCLHLKRSLSAKCVASLGTEISVPPAVDTFWQWLKEEGVVSSKTPVKPGVVPEGLGLVALKDISRNDVVLQVPKRLWINPDAVAASEIGKVCSGLKPWLAVALFLVRERSKDDSLWKHYFSILPKETDSTIYWSEEELSELKGTQLLNSTLSLKEYVKSEFRRLEEEIILPNRKLFPSPITIDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEIKGAAGLFSWDYLFSLRSPLSLKAGDQVYIQYDLNKSNAELALDYGFIEPNADRNAYTLTLQISESDPFFGDKLDIAESNGFGETAYFDIFYNRPLPPGLLPYLRLVALGGTDAFLLESIFRNSIWGHLELPVSRDNEELICRVIRETCKTALAGYHTTIEEDQKLKEAKLDSRLAIAVGIREGEKQLLQQIDEIFKEKELELAQLEYYQERRLKDLGLCGESGDILGDLGKFF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0719 489 Pfam SET domain 81 287 IPR001214 GO:0005515
Vra7g0719 489 CDD SET_RBCMT 65 303 IPR044431 GO:0016279|GO:0018022
Vra7g0719 489 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 35 480 - -
Vra7g0719 489 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 35 480 - -
Vra7g0719 489 Gene3D - 304 468 IPR036464 -
Vra7g0719 489 PIRSF RMT_SET 1 488 IPR011192 GO:0009507|GO:0030785
Vra7g0719 489 ProSiteProfiles SET domain profile. 64 288 IPR001214 GO:0005515
Vra7g0719 489 Gene3D set domain protein methyltransferase, domain 1 50 303 - -
Vra7g0719 489 SUPERFAMILY SET domain 52 308 IPR046341 -
Vra7g0719 489 SMART set_7 69 294 IPR001214 GO:0005515
Vra7g0719 489 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 1 487 IPR011192 GO:0009507|GO:0030785
Vra7g0719 489 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 311 482 IPR036464 -
Vra7g0719 489 Pfam Rubisco LSMT substrate-binding 320 444 IPR015353 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0719 Vra-Chr7 14642339 14645202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0719 57 243 NAC Transcription Factor Family AT3G56570 28.934 2.35e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vra7g0719 SET 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0719 K00592 - gmx:100818113 886.715