Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0713 ATGCAAGGAAACCCACCTTCAAAGATAAAACCACCACCAATCTCCTTTCAAACATTTCAAACACCTTCATTTCATCTCTCTGCAAACCCTTCACTTCATAACTCCCCTTTTCTTCTCCCTAACCAAGTTCATATTTTTCACTCAATGGATGCTACCACAACCTCTGAACTTCCCCCTGGCTTTAGGTTTCACCCAACGGACGAGGAACTAATCGTTTATTACCTCTGCAACCAAGCCACATCAAAGCCCTGCCCTGCTTCTATCATCCCAGAAGTCGATCTCTACAAGTTTGATCCATGGGAATTGCCAGATAAAACAGAGTTTGGAGAAAATGAATGGTATTTCTTTAGTCCACGAGACAGAAAGTACCCAAACGGGGTGAGGCCGAACAGAGCAACAGTGTCTGGGTATTGGAAGGCCACTGGCACTGACAAGGCGATCTATAGTGGATCTAAGCTTGTGGGGGTGAAGAAATCCTTAGTATTTTACAAGGGTAGGCCACCAAAGGGTGACAAGACTGATTGGATTATGCATGAATACCGATTGGCGGAATCAAAACAATCGGCTAACAGGAAAATTGGGTCCATGAGGCTGGATGACTGGGTCCTGTGCAGGATTTATAAGAAGAAGAACATCGGAAAAGCAGAGCACAAGGAGGCACAGCCAAAAGTTCAAATGACTGATCTTGTAGCTGAAAACAATGATGAGCAGAAAATGATGATGAACCTTCCCAGGACTTGGTCCCTCACTTACCTTTTGGATATGAATTACTTGGGTCCAATTTTATCTGATGGCCCCTATTGCTCAACGTTTGATTTTCAAACGAGCAATGCCAATATTGGAATTGACCCCTTAGTAAAATCTCAACCGGTTGAAATGGCCAACAATTATGTAGCAGGCTCAGGGAAGTACTGA 915 0.4383 MQGNPPSKIKPPPISFQTFQTPSFHLSANPSLHNSPFLLPNQVHIFHSMDATTTSELPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDLYKFDPWELPDKTEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGSKLVGVKKSLVFYKGRPPKGDKTDWIMHEYRLAESKQSANRKIGSMRLDDWVLCRIYKKKNIGKAEHKEAQPKVQMTDLVAENNDEQKMMMNLPRTWSLTYLLDMNYLGPILSDGPYCSTFDFQTSNANIGIDPLVKSQPVEMANNYVAGSGKY* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0713 304 Pfam No apical meristem (NAM) protein 58 182 IPR003441 GO:0003677|GO:0006355
Vra7g0713 304 ProSiteProfiles NAC domain profile. 57 209 IPR003441 GO:0003677|GO:0006355
Vra7g0713 304 PANTHER NAC TRANSCRIPTION FACTOR 56 49 280 - -
Vra7g0713 304 PANTHER BNAC06G30680D PROTEIN 49 280 - -
Vra7g0713 304 Gene3D NAC domain 66 213 IPR036093 GO:0003677|GO:0006355
Vra7g0713 304 SUPERFAMILY NAC domain 44 209 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0713 Vra-Chr7 14418285 14419829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0713 49 261 NAC Transcription Factor Family AT1G69490 68.000 3.00e-110 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra7g0713 NAM 9.4e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0713 - - gmx:100785110 458.759