Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0703 ATGGATCTGCAAAATGTGCAAAATCAAAACATGCGTTTGGTTCTGTCTACTGATGCAAAGCCTAGGCTGAAATGGACTCCTGAGCTTCACCAACGCTTCACAGAGGCTATTAATCAACTTGGAGGTGCAGAAAAGGCAACTCCTAAGAGCCTTATGAGAGTGATGGGAATTCCAGGACTAACATTGTACCATCTCAAGAGCCATTTACAGAAATATAGGCTTGGGAAAAACTCACCGCTAGAAACCTCTACTGACAACAAGCAACAAGGTTTCAGTGAAATCCAGAGTAGTGATGTTCGTTGCAGCAGGGAAATCAGTATTAGAACCCAGAATCAGATGAATGAAAGCTTGAAGATTGCTGAGGCTCTCCAAATGCAGATGGAAGTACAGAGGAAACTTTATGAACAAATTGAGGTCCAAAGACATTTGCAGCTTCGAATTGAGGCTCAAGGGAAGTACTTACAATCAGTTCTATCAAAGGCACATGAAACACTTGCAACATACGATTCTTCCACAACGGGCATAGAAGTTGCAAAATCTGAACTTTCTCAGTTAGTGTCAATAATCAACAATGCGTGTCCGACCTCTCCCATTTCAGAACTTACAGAAACAAGAGGGCTGAGTCTGAACTGTGGAGAGATGAAACAAGAAAGAGGAACCATGTGTTCACTTGAAAGTTCTTTAACATCATCTGAAAGCTCTGGGAGAACAGAAGTAAGACAACCACTAGATGAGGCAGAGAAGCCTCAAAAGACTAATGATATTTCAGTTGAATTGCCATTGATGGAGATTCACCCAGAAGGTACAGCATTCAAGGGATATACAAGTGAAGGGAGAAAGAGAAGTGCAGCAACCGATTCCTATGGTTGCTGTGTTGATCAACCTTGTGAGAAAAAATGTGGCAACAAGTTGAGGAAATGTGAACTGTCAGATATGCTTGAGTTGAACAGCCAATATCAGAGAGACATTGACTCAAGTGTGAAAGAAATAGATTTAAATTGCAGTTCAAGCTTTTGGGGACAATAA 1026 0.4123 MDLQNVQNQNMRLVLSTDAKPRLKWTPELHQRFTEAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKNSPLETSTDNKQQGFSEIQSSDVRCSREISIRTQNQMNESLKIAEALQMQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLSKAHETLATYDSSTTGIEVAKSELSQLVSIINNACPTSPISELTETRGLSLNCGEMKQERGTMCSLESSLTSSESSGRTEVRQPLDEAEKPQKTNDISVELPLMEIHPEGTAFKGYTSEGRKRSAATDSYGCCVDQPCEKKCGNKLRKCELSDMLELNSQYQRDIDSSVKEIDLNCSSSFWGQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0703 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 338 IPR044848 GO:0003700
Vra7g0703 341 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 338 - -
Vra7g0703 341 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Vra7g0703 341 Coils Coil 120 140 - -
Vra7g0703 341 Pfam MYB-CC type transfactor, LHEQLE motif 118 164 IPR025756 -
Vra7g0703 341 MobiDBLite consensus disorder prediction 222 237 - -
Vra7g0703 341 MobiDBLite consensus disorder prediction 76 96 - -
Vra7g0703 341 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Vra7g0703 341 MobiDBLite consensus disorder prediction 222 250 - -
Vra7g0703 341 Gene3D - 19 77 - -
Vra7g0703 341 SUPERFAMILY Homeodomain-like 19 76 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0703 Vra-Chr7 13940696 13942644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0703 11 299 G2-like Transcription Factor Family AT1G69580 50.836 7.86e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vra7g0703 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0703 - - gmx:100805252 507.294