Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0685 ATGGAAGAGAGAAATGATAATGGTGAGAAACTGGATGAGGTTATGCTACCGGGTTTCAGGTTCCATCCAACAGACGAGGAGCTTGTTGGATTTTATCTAAAGAGAAAGGTTCAGCAGAGGCCACTTTCTATTGAGCTCATCAAGCAGCTTGATATCTATAAGTATGATCCTTGGGATCTTCCAAAGTTAGCAACCACTGGGGAGAAAGAGTGGTATTTCTACTGCCCCAGAGACAGAAAGTACAGGAACAGTGCAAGGCCTAATAGGGTAACTAGAGCTGGGTTCTGGAAGGCTACAGGGACGGATCGCCCTATATATTCCTCGGAGGGTTCCAAGTGTATTGGTCTGAAGAAATCCCTAGTGTTCTACAAAGGTAGAGCTGCCAAAGGGATTAAAACTGATTGGATGATGCATGAGTTTAGACTACCTTCTCTCACTAACCCATCCTCATCCCCTAAGAACTTCATGGACAAGACCATTCCTGCTAACGAATCCTGGGCAATCTGCAGAATCTTCAAGAAAACCAATGCTACAGCACAAAGAGCTCTCTCTCACTCTTGGGTCTCACCCTTACCTGAAACCACCACATCAGATCATATGTTAGCCACTGATAGATATGGCAACCAATTTTCTACAGAAAACATGCCATTGCCAAAGAAAACTAGCTTAACCAGCCAGTTTTGTACTTTTAATAACAATGACTCACAACACTCAACCACTACTAGTAGCTCCACCCCTTGTCCTATAGAAATTCTAGCTTCTTATAACAAACCAATTATTAATCCATTAATGCTTTACAAGCCCTTAGATCTGTTACCCATTTCAAATGGAGACCTTGGCACTGGCTTAATATTCTCATCTCCTATTGAAACTTCAACAATCTGTGCTAAATCTTCGATGGATGTTTCTTCATTGCTAATGAGTACCTCAACTTCTGTGCTTGGAGAATTTAATAGTAAGACCTCTGAGGGAATGTGCACAAACTTTGGTGGGTTACAGGAGCATGGTAACGGCTACCAAATACCACTACTACGTGAGATGCAAGGAAGCTTTGGCAACCACGACGACAATGTGTTGGTAAAGATTCCTAACGTGAATGTGCCTCGTGTTGGTGACCAACAATCGGAGACAGTGCGATCCATTGGGTTTCCATTCGGTATTGGCGATGCATGGAAGTCAAATGTGCTTTGGGATACTTCATCTTTGTCCTTGTGA 1215 0.4288 MEERNDNGEKLDEVMLPGFRFHPTDEELVGFYLKRKVQQRPLSIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLTNPSSSPKNFMDKTIPANESWAICRIFKKTNATAQRALSHSWVSPLPETTTSDHMLATDRYGNQFSTENMPLPKKTSLTSQFCTFNNNDSQHSTTTSSSTPCPIEILASYNKPIINPLMLYKPLDLLPISNGDLGTGLIFSSPIETSTICAKSSMDVSSLLMSTSTSVLGEFNSKTSEGMCTNFGGLQEHGNGYQIPLLREMQGSFGNHDDNVLVKIPNVNVPRVGDQQSETVRSIGFPFGIGDAWKSNVLWDTSSLSL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0685 404 ProSiteProfiles NAC domain profile. 15 174 IPR003441 GO:0003677|GO:0006355
Vra7g0685 404 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Vra7g0685 404 SUPERFAMILY NAC domain 14 174 IPR036093 GO:0003677|GO:0006355
Vra7g0685 404 Gene3D NAC domain 24 179 IPR036093 GO:0003677|GO:0006355
Vra7g0685 404 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 401 - -
Vra7g0685 404 PANTHER PROTEIN FEZ ISOFORM X1 1 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0685 Vra-Chr7 13494025 13496081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0685 1 354 NAC Transcription Factor Family AT1G26870 54.474 2.43e-115 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra7g0685 NAM 6.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0685 - - vun:114179488 744.962