Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g0644 ATGGGAAGACAGAGTCCTGGAAAATGGATCAGAAATTTGCTTCTGGGGAAGAAATCGTCTTCAAAGTCTAAGTCTTCAACAGAGAAAGATATTTATAAACCTTCAAGTACCAAGGATGTTCTGGTGGTGTCTTCGGAGACATCCATGTCTTCTTCCATATCTGGTGCAAATGCTATTAAAGGAAAGCTATCAGAAAAGGAAGTAGTTAGTGTATCATCAAATGATGGGACAATTCTTTCAACTGAAGATGAGCTTTCCAATGGACAATCTCATGATAATTTTTATTCTGAGGACCGTAATGAGAAAAGCAGGATAATAAAAACAGCAATAACAACAATTCAGGCTGCAATTAGAGGCTATCAGGCGCGAGGGACATATAAAACTGTAAAAGGTATCATTCCACTGCAAGCTTATATTCGTGGCCAGTTGGTTCGAAGACAAGCTATTTCTGCTTTGTGTTGTGTGAAGTCAATAGTAAGATTTCAAGCATTGGCCCGTGGTTACAAGGTTAGGCACTCTGATATTGGCCTTGCAGTCCAGAAACTTTTGAAGGATACTAAATTCTCGAAATCTACTGGAGTAGTTACATCTACACAGGCAGTGAAACTCTCAGATAATAATACCTTTGCTCACAAGCTTCTGGCTTCATCACCCTATGCTGTTTCTCCACGTCTCAAATATAATACTGGTGAACCTAACTTGGTTTGGGAATGGCTTGACCGTTGGACGAAATCACACTTTTGGGTACCTCTTCAAGAAACTGATAAGAAAAATGGAAGTTCTCAAACTGTAGAAACTAATAAGGGACAAGTTAAAAAAAATGCCAGGAAAGGACCTTCTCACGATTTAGTCTCAGATTCCAACAAACATAAACGGTATCCAAAAAAGGATTCAAACCCCGCATTGCATTCATCTAAGGAACATCCACCAAAGGAACTTGAGAAAAGGAGTTCTAAAAAATCTCAAATTCAGAATTTTTCTGATAAGTCGCAGGCTTCTGTCGCTAGAAAAGTTTCAGATCATACAAAAGTCAATGCTGTTCCAGAGGAGGATGCTGGTGCTTCATCAGAGAAGATGAAATATTTGGCAGTGTCAAAGTCAGAAGAGTGTGATCTTGTGAAAAGTCTTATACAGCAAGCACAAGAGCATGATAATAATGAGCCATGTAATGGTACTGATTCTCCCTTGCAGCCTAGTTTGATGAATAGTAAAGATGGAGGAGTGATTGAGGAGATGAATGATGTGAAGAGTAAGAATTTCCAGAGAAGAGCTTCCCTGCCTGCTAATTTTACAGATCTTGAAAATGTGCTGCATGATAACACTCCAAGACTTCCAAGTTACATGGCTCCCACTGAATCTACAAAAGCTAAGCTAAGAGGACAGTGCTCTCCACGGTCTGTTAGTGATCTGGCAGATGTAAGCAGTATAACTCGCCGGCTTTCGCTGTCATCTTCGCTCAGTGTCAAGCTAGGTTCATTCTCTCCACGATCAGATAGATTGGCTGCCTTGACCAACAAGATAAGGACTGATAGATCTCTATCATCTTCAAGGGATGGAACTCATAAGTTGAATCAACCTCAGTGGAGAAGGTGA 1593 0.4024 MGRQSPGKWIRNLLLGKKSSSKSKSSTEKDIYKPSSTKDVLVVSSETSMSSSISGANAIKGKLSEKEVVSVSSNDGTILSTEDELSNGQSHDNFYSEDRNEKSRIIKTAITTIQAAIRGYQARGTYKTVKGIIPLQAYIRGQLVRRQAISALCCVKSIVRFQALARGYKVRHSDIGLAVQKLLKDTKFSKSTGVVTSTQAVKLSDNNTFAHKLLASSPYAVSPRLKYNTGEPNLVWEWLDRWTKSHFWVPLQETDKKNGSSQTVETNKGQVKKNARKGPSHDLVSDSNKHKRYPKKDSNPALHSSKEHPPKELEKRSSKKSQIQNFSDKSQASVARKVSDHTKVNAVPEEDAGASSEKMKYLAVSKSEECDLVKSLIQQAQEHDNNEPCNGTDSPLQPSLMNSKDGGVIEEMNDVKSKNFQRRASLPANFTDLENVLHDNTPRLPSYMAPTESTKAKLRGQCSPRSVSDLADVSSITRRLSLSSSLSVKLGSFSPRSDRLAALTNKIRTDRSLSSSRDGTHKLNQPQWRR* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g0644 530 SMART iq_5 105 127 IPR000048 GO:0005515
Vra7g0644 530 SMART iq_5 128 149 IPR000048 GO:0005515
Vra7g0644 530 SMART iq_5 153 175 IPR000048 GO:0005515
Vra7g0644 530 ProSiteProfiles IQ motif profile. 106 130 IPR000048 GO:0005515
Vra7g0644 530 MobiDBLite consensus disorder prediction 253 357 - -
Vra7g0644 530 Pfam Protein of unknown function (DUF4005) 439 500 IPR025064 -
Vra7g0644 530 PANTHER IQ-DOMAIN 5-RELATED 1 527 - -
Vra7g0644 530 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 527 - -
Vra7g0644 530 MobiDBLite consensus disorder prediction 270 322 - -
Vra7g0644 530 MobiDBLite consensus disorder prediction 1 36 - -
Vra7g0644 530 MobiDBLite consensus disorder prediction 510 530 - -
Vra7g0644 530 MobiDBLite consensus disorder prediction 254 269 - -
Vra7g0644 530 Pfam IQ calmodulin-binding motif 135 147 IPR000048 GO:0005515
Vra7g0644 530 Pfam IQ calmodulin-binding motif 156 171 IPR000048 GO:0005515
Vra7g0644 530 Pfam IQ calmodulin-binding motif 109 123 IPR000048 GO:0005515
Vra7g0644 530 ProSiteProfiles IQ motif profile. 130 157 IPR000048 GO:0005515
Vra7g0644 530 Gene3D - 102 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g0644 Vra-Chr7 12158027 12162946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g0644 1 530 IQD Protein Family AT1G14380 32.831 1.26e-59 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g0644 - - vun:114179925 780.785